KEGG   Polyodon spathula (Mississippi paddlefish): 121330835
Entry
121330835         CDS       T07273                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5 isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03020  RNA polymerase
pspa04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121330835 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    121330835 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pspa03021]
    121330835 (polr3e)
Transcription machinery [BR:pspa03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     121330835 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 121330835
NCBI-ProteinID: XP_041133615
LinkDB
Position
18:complement(5978950..6000264)
AA seq 689 aa
MASEDDDPVIQEIDVYLAKSLADKLYLFQYPIRPAAMTYDDVTHLSAKIKPKQQKVEVEM
AIDSMSPNYCRSKGEQIALNVDGTTTEESNTYSTKLMDKQTFSSTQATTNTSRYAAAVFR
KGELHLTPLHGILQLRPSFSYLDKADSKHREREAANEDGDSSQDEVEEDVKQITVRFSRP
ESEQARQRRIQSYEFLQKKHAEEPWVHLHYYGLKDSRSEHERQYLFCQFTGMAENTELVK
SPSEYLAMLMPPPVEGEVAKPECPSNVLSMAQLRNLPLGDQVRTLMKNVKVMPFANLMGF
LSPGTDSTAVLRCIQQVAMLVQGNWVIKSDVLYPKDSCSPHSGVPAEVLCRGRDYVMWKF
TQERWVERKAVAAVVKLPPEDVKDFMEQMAVTRVNRGWEFLLPHDGEFIKRHPDVAQRQH
MLWMGIQAKLENVFKLSKEDMMPKKQNPQPGLVVSGEQLVTTAREKVRENYSVLERQLQQ
RHRAQSQDLGAVRVKQEPLSDGEEPLSTGHKGAVNSLHSNDSSWDSVNGHCPLRANAAPT
QELRDFVSSIFRKHFVLTLSELKRLFNLHLASLPPGHSLFSGISDRLLQEAVLDSKCKQI
LVPFPPQGSAAADEQKVFALWEMGDSFDQHRQILLEIFIKNYCVRQNLIQGKLNQEFGDN
VTKTDLDRLLKECCVSHGGMWYLKGTVQS
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggccagtgaggatgacgacccagtcatacaagagattgatgtatacctggccaaaagc
cttgcagacaaactgtatttatttcagtacccgatacgcccagctgctatgacctatgat
gatgtcactcatttatcagcaaaaatcaaacccaaacagcaaaaggttgaagtggagatg
gccatagactccatgagcccgaactactgccgcagtaaaggagagcaaatagccctcaac
gtcgatggaaccaccacagaggagagcaatacatattccacgaagcttatggacaagcag
accttctcctccacccaggcaaccacaaacacatctcgctatgctgctgctgtcttcagg
aaaggtgaactccacttaacaccactacatggcattctccagctaagacctagtttctcc
tacctggacaaggcagattctaaacatcgggagcgagaggctgccaatgaagatggggac
tcctctcaagacgaggtggaggaggatgtgaagcagatcactgttcgtttctctcgtcca
gagtcggagcaggcgcggcagcggcgaatccagtcctacgagttcctacagaaaaagcat
gcggaggagccctgggttcatctacactactacggactcaaggacagccgctcggaacat
gagcgccagtatctgttctgccagttcacaggcatggctgagaacactgagcttgtcaag
tcacccagtgagtacctggccatgctaatgcctccgcctgttgaaggtgaagttgcaaag
ccagagtgtcccagcaacgttctgtccatggctcagctcaggaacttgccgctcggggac
caagtgaggacacttatgaagaacgtgaaagtgatgccatttgctaaccttatgggtttc
ctgagtcctgggacagactccactgcagtgctgcgctgcatacagcaggtggcgatgctg
gtccagggaaattgggtcattaagagcgatgtcctgtacccaaaagacagctgcagtccc
cacagcggcgtgccagccgaagttctgtgccgggggagggactatgtgatgtggaagttc
acgcaggaacgatgggtggagaggaaagctgtggctgccgttgttaagctgccccccgag
gacgtgaaggacttcatggagcagatggctgtgacccgtgttaaccgcggctgggagttc
cttctgccccatgatggcgagtttatcaagaggcaccccgacgtggcccagcggcagcac
atgctctggatggggatccaggccaagttagagaacgttttcaagctctccaaagaggac
atgatgccaaagaaacagaatcctcaaccaggcttggtggtgagcggagagcagcttgtg
accacggcgagggagaaggtgcgtgagaactacagcgtgctggagaggcagctgcagcag
aggcacagggcacagagccaggacctgggggcagtgcgggtcaaacaggagcccctgagt
gatggggaggagcccttgtccacagggcacaaaggggctgtcaacagcctgcactcgaac
gacagctcgtgggactctgtgaacgggcactgccccctgcgcgccaatgccgcccccacc
caggagctcagggactttgtgagcagcatcttcaggaagcactttgtcctgacgctcagc
gaactcaagaggctcttcaacctgcacctggccagcttgccccccggacacagcctcttc
agcggcatctcagaccggctgctgcaagaggccgtcctcgactccaagtgcaaacagatc
ctggtgcctttccctccccagggctctgcagcagcagatgaacagaaggtttttgccttg
tgggaaatgggagactcgtttgaccagcatcgacagatactgctggagatcttcatcaag
aactactgcgtccgccagaacctcatccaggggaaactcaaccaggagttcggggacaac
gtcacaaaaacggatttagacaggttgctcaaggagtgctgtgtgagccacggtgggatg
tggtatctcaaaggcacagtccagtcatga

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