Polyodon spathula (Mississippi paddlefish): 121330837
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Entry
121330837 CDS
T07273
Name
(RefSeq) lateral signaling target protein 2 homolog isoform X1
KO
K24780
lateral signaling target protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121330837
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
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Others
121330837
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Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
121330837
NCBI-ProteinID:
XP_041133621
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All DBs
Position
2:complement(17117581..17242658)
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AA seq
995 aa
AA seq
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MNRFRKWLYKPKRSDPQLLAQFFYADEELNQVAAELDSLDGRKDPQRCTLLVNQFRSCQD
NVLNIINQIMDECISSDRANRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNREIES
MEMRPLAKDLTRSLEEVRNTMRDQSLRDLNLHTDKMKESLRHFDSLFAEFELSYVSAMVP
VKTPKEYYVQQEVIVLFCETVERALKLGYLTQDMIDDYEPALMFTIPRLAIVCGLVVYSD
GPLNLDRKPEDMSELFRPFRTLLRKIRDLLQTLSKEELFTLERNLCISQDGEFPVVQALP
EAVVLPSLPPHLLPVPPTSAASPSDPEEPPASPRAGGQDRGTGDQLLSGKAEKTEAELAC
SMQYDEQELQQLNMMVHRVGDEMSCLLSPPSLFQSPAHRGGSSGNSSTEASPGRRPSART
NNNNNDEEEEDRVFFMDDIEGSGEALAGMDGNSSSCAMRGVHCNQQDTRKPPLQVQREAD
TAVVQNGWPGASLVEAALRLNKVSNTKALQQPPIPPPAAGTDSQSIAHLPSEGREDLNGW
ETGTEDVETAEMIAHRTGGMKLSATVIFNPKSPTLSNLTVEAAADKLLLSPASHEEPPSE
LPFEGPHKLNGLAATNCLINSCVCCGSCEDSREDGMEASGNKGKRMTSAMVIDAASSLVN
KEMDPLDSKLDCTSPIQEEVKNEQKCIKCLTHTSGTQAMTECVLQGDTGACSHQSQIERR
RQPSGGKERKVELNDRTASNREAEEHVTMKSRSSSCGSLQDSPLSSISSSDCESVSVTTC
SLSSTYTPSPISSLTTSSYTSGDLDHEEIQLALHAAKMASREKIRSRFHSSSDLIHRLFV
CISGVADQLQTNYASDLRSILKTLFEVMATKPELEDKDKQKKAGQGLRSAALEDCALCQE
NISSSEIAAKARDGEFEDPPDWVPDEVCSFCTACEAPFTVIRRKHHCRSCGKIFCSRCSS
HSAPLPQYGQVKPVRVCTHCYMFHVTPFYRDKTGI
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggttcagaaagtggctgtataagcctaagaggtcggacccgcagctcctcgct
cagttcttctatgcggatgaggagctgaaccaggtggcagctgagctggacagcttggac
ggcaggaaggacccacagcgatgcaccctgctcgtcaaccagttcagatcctgccaggat
aacgtgttaaacatcataaaccaaatcatggatgaatgtatttccagcgaccgggcgaat
cgggacttttgcgtgaagttccctgaagaaataaggcatgacaacctggcagggcagctc
tggtttggggcggagtgtttagcggctggctcgatcatcatgaaccgggagattgagagc
atggagatgcggcccctggccaaggacctgacgcgcagcctggaggaggtgaggaacacc
atgcgagaccagtccctgcgcgacctcaatctccacaccgacaagatgaaggagtcactg
cgccactttgacagcctcttcgcagagttcgagctcagttatgtgtcagcaatggtacct
gtaaagacacctaaagaatactacgttcaacaagaagtgatagtgctcttctgtgaaaca
gtggaaagggcactaaagcttggataccttacacaagacatgattgatgactatgagcca
gcactaatgtttacaattccaagactagccattgtatgtgggctggtagtttactctgat
ggaccactgaacctggatcgcaagcctgaggacatgtccgagctcttcaggccattccgc
accttattgagaaagatcagggacttgctgcagaccttgtcaaaagaggagctgttcaca
ctggagcgcaacctgtgcatctcacaggatggggagttcccagtggtgcaggcccttccc
gaggcggtggtgctgccttctcttcctccccatctccttccagtccctcccaccagtgcc
gcgagcccctctgaccctgaagaaccacctgcctctccaagagcaggggggcaggacagg
ggaacaggggaccagctgctttcggggaaggcggagaaaacggaggccgagctggcctgc
tccatgcagtacgacgagcaggagctgcagcaactcaacatgatggtgcacagagtgggt
gatgagatgtcctgcctactctccccgcccagcctgttccaatccccggctcaccgaggg
gggagcagcggcaactccagcaccgaggcctcgccagggaggaggccgtccgcccggacc
aacaacaacaacaacgacgaagaggaagaggaccgtgtcttctttatggatgatatagaa
gggtccggtgaagccctggctgggatggatggcaactcctcctcttgtgcaatgagaggt
gtccactgtaatcagcaagacaccagaaaacctcctcttcaagtccagagagaagctgac
acagcagtggtgcagaatggttggccaggggcctctctggtggaggcagccctgagacta
aacaaagtaagtaacaccaaagcactgcaacagccaccaattccaccaccagcagcaggc
accgacagccagagcattgcacacctcccctcggaagggcgtgaggacctcaatggctgg
gagacaggcactgaggacgtggaaaccgcagagatgattgcccacaggactggcgggatg
aaattatctgccaccgtcatcttcaaccccaaatccccgaccctctccaatctgactgtg
gaggctgctgcagataaactcctgctgtctcctgcttctcatgaggaacccccgtcggaa
cttccctttgaggggcctcacaagctaaatggcttggcggctacgaactgtctgatcaat
tcctgtgtgtgttgtgggagctgtgaggacagccgcgaggatggcatggaagcttcgggg
aacaagggcaagaggatgacatccgccatggttatagacgctgccagcagtttagtgaac
aaggaaatggatcctctcgatagtaaactcgactgcacatcgcccatacaggaggaggtg
aaaaatgagcaaaagtgcatcaagtgcctgacacacacctcagggacacaggccatgact
gagtgtgtcctgcaaggggatacaggggcctgtagccaccagagtcagatcgagagacgg
cggcagcccagtgggggaaaggaaaggaaagtggagctgaatgacaggacagcgagcaac
agagaggcagaggaacatgtcactatgaaatccagatcgagttcttgtggcagtttgcag
gattccccgctcagttccatctctagcagtgactgtgagagtgtgtctgtcaccacttgt
agtctgtccagcacatacacaccaagccccatcagcagcctgaccaccagctcgtacacc
tcaggggacctcgaccacgaggagatccagcttgccctgcacgcagccaagatggcatcc
cgggagaagatccgctcccgattccacagcagcagtgacctcattcaccggctcttcgtc
tgtatctcaggtgtggctgatcagctacagaccaactatgccagtgatctcagaagcatc
ttgaagacgttgtttgaagtcatggcaacaaagcctgaactggaggacaaggacaagcag
aagaaagctggccagggcctgagaagtgcagcactggaggactgcgctttgtgtcaggaa
aacatttcatcctccgagattgctgccaaggccagggacggggagtttgaagaccctcca
gactgggttccagatgaggtctgcagcttctgcactgcctgcgaagctcccttcactgtc
atccgcaggaagcaccactgcaggagctgtggcaagatcttctgctcccgctgctcctcg
cactctgcccccttgccccagtacgggcaggtgaagcctgtgagggtgtgcactcactgc
tacatgttccacgtcacccccttctacagagacaagactgggatctga
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