Polyodon spathula (Mississippi paddlefish): 121330857
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Entry
121330857 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121330857
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121330857
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121330857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_4
zf-RING_4
zf_RING_Vps8
zf-UDP
zf-C3HC4_4
zf-rbx1
RING_XB3-XBAT31
zf-RING_11
Rtf2
Rad50_zn_hook
zf-RING_10
IBR_1
Motif
Other DBs
NCBI-GeneID:
121330857
NCBI-ProteinID:
XP_041133659
LinkDB
All DBs
Position
2:17300004..17323488
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AA seq
210 aa
AA seq
DB search
MVLLPYQFSVIPDSEIMSTTPRKRRRSLSSSTQPNKRSRGTNTHSAPEMELETGLIEVAE
NTRLPSEEVVDLTCEGSEPVVVDLTSNDSVEIVDEGPGRRRSGGGESYVLSSDEEGLTER
EVYVSALVAKSAFVPSVVNSNCSRSTSGTVSCPICMDSYAEILQSGRLIVSTKCGHLFCS
QCLRNALKHAHSCPTCRKKLTHKQYHPIYI
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggtacttctgccatatcagttttcagtaatacctgattcagaaataatgagcactact
ccaagaaagcgacgcagaagtctatcttcaagtacacaaccgaataaaagaagcagaggg
acaaatacgcattcagcgccggaaatggaattggaaacggggttgattgaagtggccgag
aacaccagattgccaagtgaggaggtggtagatctaacttgcgaaggctcggagcctgta
gtggttgatttgacaagcaacgactcggtggagattgtggatgaaggtcctggtcgcagg
agatcgggaggcggtgagagttacgtgctcagcagtgatgaagagggcctcacagagagg
gaggtttatgtttctgctcttgtagccaaatcggcctttgtcccttctgtggtgaacagc
aactgttccaggtctacgtctggaacagttagctgtccaatatgcatggacagctatgca
gagattcttcagagtggacggctcattgtatcaacaaaatgtgggcacctgttctgcagc
cagtgtcttcggaacgcgctcaaacatgctcattcttgcccgacttgcagaaaaaaactc
acccacaaacagtaccaccccatttacatttag
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