Polyodon spathula (Mississippi paddlefish): 121330872
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Entry
121330872 CDS
T07273
Name
(RefSeq) cystathionine gamma-lyase-like
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00260
Glycine, serine and threonine metabolism
pspa00270
Cysteine and methionine metabolism
pspa00450
Selenocompound metabolism
pspa00670
One carbon pool by folate
pspa01100
Metabolic pathways
pspa01230
Biosynthesis of amino acids
Module
pspa_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121330872
00270 Cysteine and methionine metabolism
121330872
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
121330872
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121330872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121330872
Enzymes [BR:
pspa01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
121330872
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121330872
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
GDC-P
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
121330872
NCBI-ProteinID:
XP_041133697
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All DBs
Position
18:complement(21464764..21483763)
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AA seq
406 aa
AA seq
DB search
MESSSQKDHTNGFQSPFKSFATDALHVGQEAEQWKSMAVVPPISLSTTFKQYGPGQHAGF
EYSRSGNPTRNCLEKAVAAVDGAKYSLALASGLAATMTIAHMLKCGDNIICMNDVYGGTN
RYFRRVASEMGLEVSFVDCTKLDCLKAAIKPNTKLVWVETPTNPTMKVIDIKGCADVIHA
HNKDIIVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSMNRDDLYDRLK
FLQNAIGAVPSPFDCYLCNRGLKTLHLRMKQHFINAMAAAKFLEADPRVDKVVFPGLPSH
PQYELMKRQCTGCPGMISFYIKGDLTNATAFLSNLKLFALAESLGGYESLAEHPGIMTHA
SVPEEDRKVLGISDTLIRLSIGIEDVEDIIADLDQALKAAHPQQKN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgagctcacagaaagatcacactaatggttttcagtcaccttttaaatctttc
gctaccgacgcgctccatgttggacaagaagcagagcaatggaaatcgatggctgtggtg
ccacccatatcattgtcaaccacgtttaaacaatatggacccggacaacatgcgggcttt
gagtacagccgcagtggaaaccccacacggaattgcctggagaaagctgttgcggcagtg
gatggagcaaaatatagtcttgccctggcttcgggtctggcagccacaatgacaattgca
cacatgctgaagtgtggggacaacatcatctgcatgaatgatgtatatggaggtactaac
agatatttcagaagagtagcctccgagatgggcttggaggtgtcttttgtggactgtacg
aagcttgattgcttgaaggctgctattaaaccaaacactaagcttgtctgggttgagact
ccaacaaaccccaccatgaaggtcattgatatcaaaggctgtgcggatgtcatccacgct
cacaataaagacatcattgtcgtggtggacaacaccttcatgtctgcttatttccagcgc
cctttggcccttggagcagacatttgtatgtactccgcaacgaaatatatgaatggtcac
agtgatgttgtcatgggactggtgtctatgaatcgggatgacttgtatgaccgcctgaaa
ttcttgcagaatgcaattggagctgtcccttccccctttgactgttacctgtgtaacaga
gggctgaaaacccttcacttgaggatgaagcagcatttcattaatgcaatggcggctgct
aagttccttgaagctgacccccgtgttgacaaagttgttttcccaggattgccttcgcac
cctcagtacgagttaatgaaacgacagtgcactggttgtccaggaatgatttccttttat
atcaaaggtgaccttacaaatgcgactgcttttctcagcaacttgaagctttttgcactg
gctgagagtttgggaggatatgaaagcctggcagagcatccaggcatcatgactcacgct
tcggtccctgaagaagacagaaaggttcttggcatcagtgacacactcattcgattgtcc
atcggcatagaggacgttgaggatatcattgcagatctggatcaggctctgaaagcagca
catcctcaacaaaaaaactaa
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