Polyodon spathula (Mississippi paddlefish): 121330891
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Entry
121330891 CDS
T07273
Name
(RefSeq) xylosyltransferase 1-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pspa00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pspa01100
Metabolic pathways
Module
pspa_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121330891
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121330891
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121330891
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
121330891
Glycosyltransferases [BR:
pspa01003
]
O-Glycan biosynthesis
Glycosaminoglycan
121330891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
121330891
NCBI-ProteinID:
XP_041133744
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All DBs
Position
18:complement(7425983..7482165)
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AA seq
951 aa
AA seq
DB search
MVGVPCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSNSREKRDGVGV
GSTRNNNRAGSEFLNRGDKQHHHQAPLRKGHAVHKQQPDGYYSHRPKEKVRVDSNNENSV
PKDFENTDNSNFVARSQPQKQALTKHKERLQEKSQTEERWKENALILGKNSNEVMQYREA
KVAVTPPGRNHSKTNPGVQTGPRTAKLQPSPSHIPHPHHQQLQHHHGKKATTRAISSPQI
KYDQPPKCEISGKEAISALSRAKTKECRQRIAEIYCQHKERLLMPEKVTRFCPLEGKANV
NLQWDEDSVEAVPTNPVRVAFVLVVHGRASRQLQRLFKAIYHADHYYYIHVDQRSNYLHR
QVVVMASQYPNVRVTPWRMSTIWGGASLLTMYLQSMKDLLDMGDWSWDFFINLSAADYPI
RTNDQLVAFLSKYRDMNFLKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGITV
DGGSDWFLLNRKFVNYVINSQDDLVTNMKRFYSYTLLPAESFFHTVLENSPHCESMVDNN
LRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTARPTFFARKFEASVNQEIV
TQLDGFLFGSLPSGTPGLKAYWENVFDEPDGVHSLSDSQLTYYHAFARMGLQRAANSLQG
DPNDSSCRYFPMGHPVSVHLYFLSDRFQGYLVRHHATNLATSKLETLETWVMPKKVFKIA
NPPRNFERLQFAEIGTDWDAKERIYRNFGGLMGPTDEPVGMQKWGKGANVTVTVVWVDPT
NVIAATYDILIEASAEFTHYRPPLNLPLRPGIWTVKVLHHWSPVAETRFLIAPLAFYNHQ
PIRQDDALRLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEAAKRNAGLTGRELERWVDE
LVGAHWSALDVCSVGPSNCPVMQACSQTTWSALSPDPKAELGPVRADGHLR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgttccgtgcgctcgtagactggctcgccgctcacggtccgccttgatagcg
gcgctcaccgtattgcttgtgcaaacgctgatcgtttggaacttcagcagcttagactcg
ggcgaagaccgagagaacggtggctccaacagccgggaaaagcgggacggagttggggtc
gggagcaccagaaacaataaccgagccggcagcgagttccttaaccgcggggataagcaa
catcatcatcaggctccgctgagaaagggacacgctgtgcacaagcagcagccggacggc
tattactctcaccggcccaaggagaaagtgcgagtggacagcaacaacgagaactcggtg
cccaaggactttgagaacactgataacagcaactttgtggcacgctcccagccacagaag
caggcactgaccaagcacaaggagcggctgcaagagaaatcacagacagaggagcgctgg
aaagagaatgccctgatcctgggtaagaactccaacgaggtgatgcaatacagggaggcc
aaagtggcagtgaccccaccggggcggaaccatagcaagactaaccccggggtccagacg
ggtcccaggacagccaagctgcagccgagccccagtcacatccctcacccgcatcaccag
cagctgcagcatcatcatggcaagaaggcaacgacaagagccatctcctcgccccaaatt
aaatacgaccagccgcccaagtgcgagatcagcggcaaggaagccatctccgccctgtcc
agagccaagacaaaggagtgccgccagcgtatcgcagagatttactgccagcacaaagag
aggctcctcatgcccgagaaagtcacccgcttctgtcctttagaaggtaaggcgaatgtg
aacctgcagtgggacgaggactcagtggaggccgtgcccacaaacccagtgcgggttgcc
tttgtcctggtggtgcacggccgggcctcccgccagctgcaaaggttgttcaaggccatc
taccacgctgaccactactattacatccacgtggaccagcgctcaaactatctccacaga
caggtagtggtgatggccagtcaataccccaacgtgcgggtgactccctggcgcatgtcc
accatctggggaggagccagcctgctgaccatgtacctgcagagcatgaaggacctgctg
gacatgggcgactggagctgggacttcttcatcaacctgagtgcggccgactatcccatc
aggacaaatgatcagctggtggccttcctttccaagtacagggacatgaacttcctcaag
tcacatggcagagacaacgctaggtttatccgaaagcaggggctggacaggctgttcttc
gagtgtgacacccacatgtggcgactcggggaccgcaagattccggagggcatcactgtg
gacggaggctcggactggttcctactaaacaggaagtttgtgaactacgtcatcaactcc
caggatgacctggtgaccaacatgaagcgcttctactcctacacgctgctccccgccgag
tccttcttccacacggtgctggagaacagtccccactgcgagagcatggtggacaataac
ctgcgcatcacaaactggaaccgcaagctgggttgcaagtgtcagtacaagcacattgtg
gactggtgcggctgctctcccaacgacttcaaacctgcagacttccaccgcttccagcag
actgctcggcccacattcttcgccaggaagttcgaggcgagtgtgaaccaggagatcgtg
actcagctggatgggttcctgttcggcagcctgccctcaggcacccccggcctcaaggca
tactgggagaatgtctttgacgagcctgacggtgtccacagcctctccgactcccagctc
acctactaccacgcctttgcacgtatggggctgcagagagccgccaactccttgcagggc
gaccccaatgacagcagctgcaggtatttcccaatgggacaccctgtgtcagtccacctg
tacttcctgtcagaccgttttcaaggttatctggtgaggcaccatgccaccaacctggcg
accagcaaactggagacgctggagacctgggtgatgcccaagaaggtgttcaagattgcc
aacccacccagaaactttgagagactccagtttgcagagattggcacggactgggatgcc
aaggagcgcatttaccggaatttcggagggctgatgggcccgacagacgagccggtgggg
atgcagaagtgggggaagggggccaacgtgactgtgacggtggtctgggtggatcccacc
aatgtgatcgcagccacctacgacatcctgatcgaggcgagcgccgagttcacacactac
cggccaccgctcaacctgccgttgcggcctggcatctggactgtcaaggtgctgcaccac
tggagcccggtcgcagagactcgcttcctcatcgccccgctcgccttctacaaccaccag
cccatcagacaagatgatgctttgaggctgcacaacggaccagccaagaacagctacatg
gagcagagcttccatgggctcaatccggtgctgaacatcccggtccacctggggcaggtg
gaggcagccaagcgcaatgcagggttgactggtagagagctggagcgctgggtggacgag
ctggtgggggcacactggtctgcgctagacgtgtgttccgtggggcccagcaactgtccg
gtcatgcaggcctgcagccagaccacatggagtgcgctcagccccgaccccaaagccgag
cttgggccagtcagagcagacggtcacctcaggtag
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