Polyodon spathula (Mississippi paddlefish): 121330917
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Entry
121330917 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121330917
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121330917
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121330917
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121330917
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121330917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
121330917
NCBI-ProteinID:
XP_041133822
LinkDB
All DBs
Position
18:complement(33652678..33693313)
Genome browser
AA seq
2624 aa
AA seq
DB search
METEEEQHTTTLLCMGFPDAAAIRKALRMAKNDINEAVALLTNESPGLGYGYEPMESGPG
PSGDGESSGRSGGGSGGFDPPPAYHDVVEGEKNNDENGNCSGGIAEFPTTNLYELESRVF
TDHWSIPYKREESLGKCLIASTCLAKLSLADADENCKRFIDRCMPEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVDLVAERVKLEPIPVGLLGVLTMAFNPDNEYHFKNRMKGCQRNWS
EVFGEGSMFAVSLSSSFQKEPHGWLVDLVNRFGELGGFAAIQSKLGSEEIEIGCVSALVQ
PLGVCAEYLNSSLVQPMLDPVIHKMITYVQNVEEKDLKDKRLVSIPELLSAIKLLCMRFQ
PDLVTVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEDSTVSKTVKNAIDTDKLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSIIWRIQAGQSSTVIENIHTI
IAAAAVKFNFDQLSHLFVLIQKSWEMESVRVRQKLLSLIGRIGREAHSEVTAGKVLEVLW
ELAHLPTLPTSLVQQALEEHLAILSDAYAVKEAVKRNYIIKCIEDIKKILIQEETKTPME
TQVSFLMGSWGKKKPGSISKSSQQSNPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSII
QDLKKNFEIVKLITGSLVSCHRLAVSAAGPGGLSGSTLVDGRYTYQEYLEAHLRFMAFFL
QEASLYLVWNRAKDMWECLVSGVDICELDREMCFEWFTKGQHDLESDVQQQLFKEKILKL
EPYEITMNGFNLFKTFFESVNLSDHRLKRQGMQLFVERLDLAGMDFIWRIAMESPDEEIA
NEAIQLIITYSYINLNPKMRKDSVSLHKKFIADCYKRLDAASSALGGPTLTHAVTRATKM
LTATAMPTVATSVQSPSRSTKIIIIERLLLLAERYVLTIEDLYSVPRTILPHGASFHGHP
VTLHVTYESTKDTFVLEAHSNETVGSVRWKIAEQLNCPVDNVQIFTNDSVLTVNKDQKLL
NQLGFSDEQGLTVKTSGTGTPSGSSADSSASASSSSSSSVFNSAYALEQEKSLPGVVMAL
VCNVFEMLYQLANLDETRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTV
ASGSQASKSPSLSSKQQHQQSASSILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTTDDE
MAKTSVKSFCENFLKAGGLSLVVNVMQKDSIPSEVDYETRQGVYSICLQLARFLLVGQAM
PSSLDEVISKDGVDALSSRPFRNASRQNSRQLSFSGTPEKSSYRQMSVSDRSSIRVEEII
PAARVAIQTMEVNDFTSTVACFMRLTWAAAAGRLDLVGSSQPIRESTNSLFPLGVRSRLS
STGSNCSSGSEGEPTTLHAGICVKQNCVSIKDTIIAREALSLLVTCLQLRCQQLGSFYNL
PCVSDFIIDILLGSPSGEIRSVACDQLYTLSQTDTSAYPDLQKPNLFLLRVVLSAQLPLW
SPTSIMRGINQRLLSQCAEYFDLRCQLLDDLTSTEMEQLQISPAAMLEDEINWLDNFEPT
WTAELETSEADNILQAGHLRLIKTLLSLCGNDKEQLGPSLIQQLLDDFLFRASRIILNSN
NPTGSSSISQQDFHPKCSTVSSRLAAYEVLVMLADSSLCNLQLITTELLSMHHQADPALT
KEFDYLPPVDSRSSSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLTIEEETENPEESV
FYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELFVREQQDAYEFFTSLVDQLDEHLKK
INREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVL
EGSNAYYCEKCKEKRTTVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIKFPWVLN
MEPYTVSGMARQDSTSEHGENGRGGEQGGSPRKKVTISENYELVGVVVHSGQAHAGHYYS
FIKDRRGSAKGKWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWN
AYMLFYQRISDQNSPVLPKKSRVSVMRQEAEDLTLSAPSSPEVSPQSSPRPPRANNDRLS
LLTKLVRKGEKKGLFVEKMPVRIYQMVRDENLKFMKNRDVYNSDYFSFTLSLASVNATKF
KHPAYQAMAKVSLQLAIQFLFHTYLRTKKKLRVDTEEWIATIEALLSKSSEGCQWLIEYL
VGSEGRELIKICLLESCVREVRIVVATILEKTLESALHYQDKGLDQLLEVLLSLLDKDVP
ENCKNCSQYFYLFSNFVQRGHKSCQLLLQHSAYKRMLIFLLGPSRQNNQNRRWSSAQARE
FLHLHNTLAVMVLHTDASGQRTVAPGQYKQSPPVSISMPGPLLALHGDIEALLFKPEGQP
YLLEVMFAMRELSGPLSFLLEMIISCCFCNEPFSLAVLQLLKHQLETAPPHELKNIFQLL
LEILVVEDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCSPAKDY
FKENSNHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEK
EQSGSSNGSEESPANDNSDRSLRQGSESPMILGDSKSDLDDVDP
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaggaggagcagcacacgaccacgctactgtgcatgggcttcccggacgca
gccgccatccgcaaggcccttcgcatggccaagaatgacattaatgaggcggtggcgctg
ctcacgaacgagagccccggactcggctacggctacgagccgatggagagcggacctggg
cccagcggtgacggggagagcagcgggagaagtgggggtggtagcggcgggtttgatccc
cctcccgcctatcacgatgtggtggaaggagagaagaacaatgatgagaatgggaactgt
tctgggggaatcgctgagttccccaccactaacctgtatgagctggagagccgggtgttt
actgatcactggtccataccttacaagcgcgaggaatcgctgggcaagtgcctgattgct
tccacgtgcctggcgaagctgagtcttgctgatgcagacgagaactgcaagcgcttcata
gacagatgtatgcctgaagcattcaaaaagttgctaacgtcaagtgctgtccataagtgg
ggtactgaaatccacgaaggtatctacaacatgctgatgttgctggtggatttggtggca
gaaagagtgaaactggagcccatccctgttggcctcctgggagtgctgacaatggctttc
aaccccgacaatgaataccatttcaaaaaccggatgaaaggctgccagaggaactggtct
gaagtctttggtgaaggaagcatgtttgctgtctcgcttagttccagcttccagaaggag
ccccatggatggcttgtagatttggtaaatcggtttggagaactgggcggctttgctgct
attcaatccaaattgggctccgaagaaatagaaattgggtgcgtctctgctttggtccag
cccctgggagtgtgtgcggagtatctgaactccagtctagtacagcccatgctggaccca
gttattcacaaaatgatcacatacgtgcagaatgtggaggaaaaagatctgaaagataag
cggcttgtgagcatccctgagctcctgtctgctataaagctgttgtgtatgaggtttcag
cctgaccttgtcacagtggtggacgaccttcgattggacatcctcctgcgcatgctgaaa
acgccacacttcagtgccaagatgaattccctgaaggaggttactaagttgatagaagac
agtacagtgtccaagacagtgaagaatgccatcgacactgataagttattggactggctg
gtagaaaactcagttctgtcaatagccctggaagggaacattgatcaggcacagtattgt
gatcgaataaagggaattatcgagctgttggggagtaaactgtctttggatgaattatct
ataatctggagaatacaggctggccagtcttccactgttatcgagaatatccacaccatc
attgctgcagcagctgtgaagttcaactttgatcagctcagccacctgtttgttcttatt
cagaagagctgggagatggagagtgtccgggtgcggcagaagctgttgagcctcattggg
cggattggacgggaggctcattccgaggtcaccgctggaaaggtgctggaggttctttgg
gagctggcccacttgccaacgttgcccactagcctggtgcagcaggccctggaggagcac
ctcgccatcctgagcgatgcctacgcggtcaaggaggcggtgaagagaaactatatcatc
aagtgcattgaggacatcaagaagatactaattcaggaggaaacaaaaacgcccatggag
acacaagtctcttttctaatgggttcctggggcaagaagaaaccaggttcgatttcaaaa
tcatcccagcagagtaacccccaggcggtctgggttgtgccagccctgcgccagctccat
gagatcacacgctccttcatcaagcagacctatcagaagcaagacaagcagagcatcatt
caggatctgaagaagaacttcgaaatcgttaagctgataacaggcagcctggtctcctgc
cataggctcgccgtgtctgcagcaggccctggggggctgtctggatccacgctggtggac
ggcagatacacttatcaagagtacctggaagcgcatctgagattcatggcttttttcctc
caagaggccagcttgtatcttgtatggaacagggctaaggacatgtgggagtgcctggtg
tctggggtggatatctgtgaacttgatcgagagatgtgctttgagtggtttacaaaagga
cagcatgatctggagagcgacgtccagcagcagcttttcaaagagaaaatcctcaagttg
gagccttatgaaatcaccatgaatgggtttaaccttttcaagaccttctttgagagcgtg
aatctgtctgaccatcgtttgaaaagacaaggaatgcagttgtttgtagaaaggctggat
ttggcagggatggattttatctggaggatagctatggagtcaccagatgaagaaattgcc
aatgaagcaatccagctgattattacctacagctacatcaacttgaatcccaaaatgaga
aaggattcagtgtccctacacaagaaattcattgcagattgctacaaaagattagatgct
gccagttcagcccttgggggtcctactcttactcatgctgttaccagggctaccaagatg
ctgacggctacagccatgcctacagtagccacgtctgtgcagtcaccttccaggtctaca
aaaattataataattgaaagattgctgctacttgcagaacgatatgtcctcactatagag
gatctgtattctgttcctcggactatcctacctcatggtgcctccttccacggtcatcct
gtgaccctgcatgtcacctatgagtccaccaaagacacgttcgtgctggaggcacacagt
aatgaaaccgttgggagcgtcaggtggaagatagcagagcagttaaattgtcctgtggat
aatgtccagatattcactaatgatagcgtgttaacagtgaataaagatcagaagctgctg
aaccagctggggttctcagacgagcagggtctgacggtgaagacctccgggacgggcact
ccctctggcagctctgcagactcctccgcctctgccagcagcagcagcagcagcagcgtc
ttcaactccgcctacgccctggagcaggagaagtctttgcctggtgtggtgatggctctg
gtgtgcaatgtgtttgaaatgctgtaccaacttgccaacttagacgagacgaggataacg
ttacgagttcggaaactacttctactaattcccacggaccccgaagttcaggatgccctt
gataactttgtccccaaagaatcaagcgtatggagtcaccaaaaaaccttgtttacagtg
gcgtcaggatctcaggcttcgaagtccccctccctgtcctcgaagcagcagcaccagcaa
agtgcctcctccattctagagagcctcttccggtcctctgctcctggcatgtcaaccttc
agagtgctctacaatctagaggtcctcagttctaaattgatgccaacgacagatgatgaa
atggcaaaaaccagcgtgaaatctttctgtgagaactttctcaaagcagggggcttgagt
ttagtggtgaatgtcatgcagaaggactctattccttcagaggtggactatgaaaccagg
cagggcgtttactccatttgcttgcagcttgcaaggtttctgttggtgggccaggctatg
cccagttctctggacgaggtgatatcaaaggatggcgtggacgcactgtcctcaaggccg
ttccggaatgccagccgacagaacagccgacagctgtccttcagcgggacccccgagaaa
tcctcctaccggcagatgtccgtgtcagaccggtcgtcgatcagggtcgaggagatcata
ccggctgcacgagtagccattcagacgatggaagtgaatgacttcacctcgactgtggcc
tgcttcatgcgcctcacctgggcagcagcagctgggcgccttgacttggtggggagcagc
cagccgatcagagagagcaccaactccctgttccctctaggggtgcgcagtcgcctcagc
agcacaggtagtaattgcagctctgggagtgagggagagccaacgaccttgcacgctggg
atctgtgtgaaacagaactgtgtgtccatcaaagacactatcattgcccgagaagcctta
tctttactggtaacctgtctgcagctacgctgccagcagttaggttccttttataacttg
ccttgtgtaagtgatttcattattgatattcttcttggatcacccagtggagagatccgc
agtgtggcctgtgaccaactctacacactgagccagacggatacctctgcctatccagac
ctgcaaaaacccaacctgttcttgttgcgggtggtgctgagtgcgcagctgcccctgtgg
tcaccaaccagcatcatgagaggcatcaatcagaggctgttatctcagtgtgctgagtac
tttgacttgagatgccagttacttgatgatttgacctcaacagagatggagcagttacag
atcagcccggctgccatgctggaagatgagataaactggttagataactttgagccgacg
tggaccgcggagctggagacgagtgaagctgataacatcctgcaggctggccatttacga
ctcatcaaaacccttttatcactatgtggaaacgacaaagaacagctgggtccttctctg
atccagcagttgttggatgactttcttttccgtgcctctcggattattttaaacagcaac
aaccccacgggcagctcgtctatcagccagcaagacttccaccccaagtgcagcacggtg
agcagtcgcctggctgcctacgaggtgctggtgatgctggcggacagctccctctgcaat
ctgcagctcatcaccacagagctgctgtccatgcatcaccaggcagaccctgcgctcacc
aaggagtttgattacctgcctcctgtggatagtcgctccagctctggttttgttggactg
aagaacggtggagccacctgctacatgaatgcagtgtttcagcagctctacatgcagcca
ggtcttgcagaggccttcctgacgattgaggaggaaacggagaatccggaggaaagcgtg
ttttaccaggtgcagtctttgtttgggcacctgatggagagcaagctgcagtactacgtc
cctgagaatttctggaagatctttaagatgtggaataaggagctgtttgtaagggaacag
caggatgcctatgaattcttcaccagtcttgtggatcagctggatgaacacttaaagaaa
attaatcgggaacagatattcaagaacactttccaaggcattttctcagatcagaagatc
tgtaaagactgtccacacaggtatgaacgcgaagaaaccttcatggctctgaatttaggg
gtaacctcatgccagagtctagagatctccttggatcagtttgtgcgaggtgaagtgctt
gagggaagcaacgcctactactgtgaaaagtgcaaagaaaagcgtacaacagtaaaacgc
acctgcatcaagtctctgcccagtgtcctagttattcacttaatgaggtttggctttgac
tgggagagtggccgatccattaaatatgatgaacagattaagttcccctgggtgctcaac
atggaaccctacactgtttctggaatggcccgccaggattccacttcagaacacggggaa
aacggccgtggtggggagcagggcggctccccacggaagaaagtcaccatatctgaaaac
tatgagctcgtcggggtggttgtgcacagcggccaggcacacgctgggcattactactcg
ttcattaaggataggcggggaagtgccaaagggaagtggtacaaattcaatgacaatgtg
gtggaggaatttgacatgaatgatgagactttggaatacgaatgttttggaggggagtac
cgacctaaagtctacgatcaatctaacccttaccctgatgtgcggagacgatactggaac
gcctacatgctgttctaccagagaatttcagaccagaactctccggttctaccaaagaaa
agccgcgtcagcgtgatgcggcaagaagcagaggatctgaccctgtcagcaccgtcttcc
cctgaggtctctcctcagtcgtcccctcgtcctccaagagccaataatgaccgcctctcc
ctgctgaccaagctggtgagaaaaggggagaaaaaggggctgttcgtggagaaaatgcca
gtaagaatataccagatggtaagagatgagaacctcaagttcatgaagaacagagatgtg
tataacagcgactacttcagtttcacattgtctctggcttctgtcaatgcaacaaaattt
aaacatccggcgtaccaggcaatggcaaaggtgagcctgcagctagctatccagttcctc
ttccacacctatctgcgcactaagaagaaactcagggtagacactgaagaatggattgca
actatcgaggctctgctttccaaaagcagcgaaggctgtcagtggttaattgaatacctg
gtgggatctgaaggacgagagcttatcaagatttgccttctggaaagttgtgtaagagag
gtccgaatcgtcgtagccactatcttagagaagacattggagagtgccttacattatcaa
gacaagggtcttgatcagttgctggaggttctgctttcactgctggataaggatgtccca
gaaaactgtaaaaactgttctcaatacttctatctgttcagcaactttgtacagaggggt
cacaagtcttgtcagctgcttctacagcattctgcttataagcgaatgttaatcttccta
ctggggcccagcaggcaaaataaccagaaccgtcggtggagctccgctcaggcccgcgag
ttcctgcacctccacaatactctggcagtcatggtgctgcacacggatgcctctggtcaa
aggactgtagctcctggtcaatacaagcagagccctcctgtcagcatctccatgcctggt
cctctccttgctctgcatggggatatagaggctctgctcttcaaaccagagggacagccc
tacttactggaggtgatgtttgcaatgcgggagctgtccgggccgctctcctttctcttg
gagatgatcatatcctgctgtttctgtaatgagcccttctccctggccgtgctgcagctg
ctcaagcatcagttggagactgcgccccctcatgagctaaagaacattttccagctgctg
cttgaaatcttggttgttgaggatccactgcagactcagcgactgaagtatgcattcgag
tctgaaaaaggattgctagctctaatgcaccagagtaacaatgtggacagcagccgctgc
taccagtgtgtgaaattcctggttacactcgcccaaaaatgctcccctgccaaggattac
ttcaaggagaactcaaaccactggagctgggctgtccagtggctgcaaaagaagatgtcg
gaacactactggacacctcagagtaatgtttcaaatgagacgtccactgctaaaactttc
cagcgcactatttcagcacaggacactctggcctatgctacagcacttctgaatgagaag
gagcagtctgggagcagcaatgggtcagaggagagcccagcgaatgacaattcagacaga
agcctaagacagggctcagagtctccgatgatactcggggattcaaaaagtgatctagat
gatgtggatccttag
DBGET
integrated database retrieval system
