Polyodon spathula (Mississippi paddlefish): 121330994
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Entry
121330994 CDS
T07273
Name
(RefSeq) tuberin-like isoform X1
KO
K07207
tuberous sclerosis 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04115
p53 signaling pathway
pspa04140
Autophagy - animal
pspa04150
mTOR signaling pathway
pspa04218
Cellular senescence
pspa04910
Insulin signaling pathway
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121330994
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121330994
09143 Cell growth and death
04115 p53 signaling pathway
121330994
04218 Cellular senescence
121330994
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121330994
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121330994
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121330994
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121330994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
CENPU
FtsA_C
Motif
Other DBs
NCBI-GeneID:
121330994
NCBI-ProteinID:
XP_041134001
LinkDB
All DBs
Position
18:complement(9981542..10017139)
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AA seq
1838 aa
AA seq
DB search
MKKQQQQQQQQQQQSKESLTDKMKGLFGLRQPRISTRQAESRPSEFIITVDTLKELNPEC
GLHSRIRVINHVCELAKSKKFEENAVVTVWKAVEDLLHPDQPVEARHAVLQLLKAIIQGQ
GERLGPLRAYFFKIVKDYPSNEHLHERLEVFKALTENGKDITYLEEDIAGFVLLWMDTGL
TAEFLRVLVNLVKFNSCYLDQNVSQMVHKICLMCNQTTASTDIEVSLQVLDAVVCYNCLP
SDSLLVFIITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCHVMEERAYMEDAAVL
RGAVFFVGMALWGAHRLSTLKNTSTSVLPSFYKAMTCTNAVVSFEIVLSVTRLIKKYGKE
LQDVTWDILLNIIEKLLQQIQTLGNPELKSIAHELLSTVEELYEQNGYHGSHERFFGLIE
TCSDTRPEASVLTLLSFQAHSIHPAKDGWIQNLQRLMEKFFRNETRSNIRIKVLDILSFV
LSINRQLYEEELIESVVIPQLSQIADDKHLHVRRLATQLLVDLAEDCNTHHFNSLLDIIE
KVVNRPLFYPVAAEAVDGEVASESPMEDVKTAVLGLLEILQTKLYTLPASHASRVYELLI
SHIQLHYKNKYSSAIASSIRLQVFDFLLLLRADSLHRLGVPNKDGVVRFSPYCLCDLGEQ
EKRTNEKKPPGTVSPPAGSPTPSNQTSSLIRMGYLPFSLAFGLLLQCLKLETDWKVVKLV
LDKLPESLQYKVLILSSPCNIDQLGTILCAMFTDRLVSERSRKITDSFPRADAQLSVVPV
LAALSSFHKYLEQGRQRELVQCLICRCGRQCIVALSMCTIEMPDVMVKLLPALIVKLTHI
SATVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFALSLPYTNPSKFNQYIVSLAHHVI
AMWFIRCRLTFRKDFVQYITKGLRSNALLPFDESQEQSSFRARSTSLNERPKSLRTAKFA
KPGFNNSSPVKELKDLSGIDAFRSRSISVSEHAVRRMQTSMTTSSLGSADESSVAEADDG
LRTVHLELTETCLDMMARYVFSNFSALPKRSPVAEFLLTGGRSMTWLVGNKLVTITTSSG
ARTRSLLGLDLTERQSLGEMTRSDPSLHTRQTKEAPAKLESQAGQQIGKAARIRVRSMSG
GHALRAGTAQSLSPLVSPPDSEFYDPPSQSIQVSENSANFKLEPSLQKEKPSLGEYAPLL
TQGWAEIFIRRPSGNTSWLMCLENPPSPFSSENGSMPLQELSNILMSVERTKKPRASEVL
KSNLEPSSSQAYVTQKTSALQRSNTDSVVVLEEGNMLGARPKERASPTGIQDREEFEAVQ
PEPIFMGDKFNNPQEAYSRSSSSSSQEDDKSTPLEYVGGGVIPIEKGIFQSAGDPMEEEE
EEEEDLSFQPSQTINKSSSSLELQTLQEAFKDAVNKEETAAGKLSIEAEPGPTDVNSQLE
ASAGGGGGGGAGAGFGGGAGAGAAASAGAMPRSRLEFPAPQPNLVSPGGHRPRGHTISGS
TPSHWERKMDHDSYHRGAASNSEKMSGISPSFVFLQLYHSPFFGNESNKPLLLPKSQLVD
RTVKVLDQMPPYDTHKIGVVYVGEGQINNEVAILSNEYGSYRYAQFLTGLGKLIHLKDCD
PDQIFLGGLDQYGDDGEFTYCWHDDIMQTIFHIATLMPNRESDKGCCNKKRHIGNDFVIV
VYSDAGEEYKLGTIKGQFNFVEVIIKPLDYESNLVTLQCRKDLEGLVDISVAKIVSDKNL
ALLVRQMALHANMASLVHQYKSNPCDAYASKWLARLRHIKKLRTRAQQEMQSRQTSGISL
NQAHTPMQNKSSHQQAGASEPGQRKHLVSTVDDFTDFV
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcagcagcagcagcagcagcagcagcagcagcagagtaaggaatctctgaca
gacaagatgaagggcctgtttgggctgagacagccacgcatcagtaccaggcaagcggag
agcagaccctctgagttcatcataactgtggacaccctgaaggagctgaatcccgaatgt
gggctgcatagcagaatccgggtcattaaccatgtatgtgagcttgcaaaatccaagaaa
tttgaagagaatgcggtggtgactgtttggaaagcagtggaggatttgctgcaccctgat
caaccggtagaagccagacatgcagtgcttcagctactcaaagctatcatccagggccag
ggtgaaaggctggggcctcttagagcttatttctttaagatcgttaaggactatccctcc
aatgaacaccttcacgaaagacttgaggtcttcaaagctctaacagagaatggcaaggac
atcacatacttggaggaagacattgctggctttgtgcttctgtggatggacactggtttg
actgcagaattcctccgggttcttgtcaaccttgtcaaattcaacagctgctacttggat
cagaatgtttcacagatggtccataagatatgcctcatgtgcaaccagactacagcttca
acagatatagaggtttctctgcaagtgctggatgctgtggtttgttacaactgcctcccc
tctgactccctgcttgtttttatcatcactctgtgccgcacagtgaatgtcaaggagttt
tgtgaatcctgttggaagctgatgcgtaaagtcctgggcactcatttaggacacagtgcg
atctataccatgtgccacgtcatggaagagagagcctacatggaagatgcagctgttttg
cggggggctgtgttcttcgtaggtatggcactgtggggggctcaccggctttcaactctg
aagaacacatcgacatctgtgctgccatcgttctataaggccatgacttgtaccaatgct
gtggtatcctttgaaatagtcctctcggtcacaagattgataaagaagtatgggaaggag
ctgcaggatgtcacgtgggacattcttctcaacatcattgaaaagttacttcagcaaatt
cagactttaggtaatcctgaactgaagtccattgcacacgagctgctgtccacagtagag
gagctgtatgaacagaacggttaccacggctcccacgagaggttctttgggctgatagaa
acatgttcagatacaagacctgaagcctctgtcttgacgctgttgtcattccaagctcat
tccattcacccagcgaaagatggctggattcagaacctacagaggctgatggaaaagttc
ttcaggaatgagaccaggagtaacattagaatcaaagttcttgacatcctgtcgtttgtg
ctcagcattaaccgacagttatatgaggaggagctgattgagtcggtggtgattccccag
ctcagtcagattgctgatgacaagcaccttcatgttcgcaggctggccacacagctgctg
gttgacctggctgaggactgcaacactcatcatttcaacagcctcctggacattatagag
aaggtggtgaaccggccgttgttttaccctgttgctgctgaggcagtagatggggaggtt
gcttctgagtctccaatggaagatgtaaagactgcagtccttggacttctggagatatta
cagaccaaactgtacaccttgccagccagccatgccagcagagtctacgagctactgatc
agccacatccagctacactacaagaacaagtactcctcagccattgccagcagcattcgc
ctacaggtttttgatttcctcttgctcctgcgtgctgactccctccatcgtttaggggtt
cctaataaggatggtgtggtgaggtttagcccatactgcctctgtgatttgggtgagcag
gagaagagaacaaatgaaaagaaaccgccaggaacagtgtctccccctgctggtagtcct
actccaagcaaccagacctcatccttaattcgcatgggctacctccccttctcgttggct
tttgggctattgttgcagtgtttgaaactggagaccgactggaaggttgtgaagctggtt
cttgataagctgccagagtctctgcagtacaaagttcttatcttgtcttctccatgtaac
attgaccaactgggcactattctgtgtgctatgttcacagatcggctggtttcggagcgg
tcacgcaaaatcacggatagttttccccgagctgatgctcagctgagtgtggttccggtg
ctggcggctttatcctccttccataagtacctggagcagggcagacagagggagctggtt
cagtgtttgatttgccggtgcggcaggcagtgtattgtagcactctcaatgtgcaccatc
gagatgccagatgttatggtcaaactgcttcctgccttgattgtgaaactcactcacatt
tctgccactgttgctatggcctctcctatgttagaatttctatcaactttggtcaggctt
ccacacctgtatgcaaactttgtggctgaacagtacgtgagcgtgtttgctctgtccttg
ccgtacaccaacccttccaagtttaaccagtatatagtgtctttggcccatcatgtaatt
gccatgtggttcatccgatgtcgtctcacatttcggaaggactttgtgcagtacatcaca
aagggtttgagatccaatgctcttcttccatttgatgaaagccaggaacagagcagcttc
cgagcacgcagcaccagtctcaatgagaggcccaagagtctgcggactgcaaaattcgca
aagccaggcttcaataactcctccccagttaaagagctgaaagatctctctggtatcgat
gccttccgctcccgcagcatcagcgtatccgagcacgccgtgcgcaggatgcagacttcc
atgaccaccagcagcctgggttctgcagacgagagctctgtggctgaggctgacgatggc
ttgaggaccgtccatctggagctgacagagacctgtctggacatgatggcgagatacgtc
ttctccaacttctccgccctgcccaagagatcccctgttgctgagttcttgctgactgga
ggaagaagcatgacctggctggttggaaacaagctggttaccataacaaccagcagtgga
gctaggacccgatccctgctcggccttgatttgacagaacgtcagagtttgggagaaatg
acaagatctgacccttctcttcacacgagacaaaccaaagaagcccctgctaaactggaa
tcccaggcaggccagcaaatcggcaaggcggcccgcatcagagtgcgatccatgtcaggt
gggcacgcccttcgtgctggcactgctcagagcttgagtccactggtgtccccccccgac
agtgaattctacgaccccccttcccagtccattcaggtttctgagaactcggcaaacttc
aagctggagccctctctccagaaggagaagccaagcctgggggagtatgcgccactgctc
acccagggctgggcagagatcttcatccgcagaccctctggtaacacaagttggttgatg
tgcctggagaaccctccaagccccttttcatcagagaacggaagcatgcccctgcaggag
ctttctaatatcctgatgtctgtggaacggaccaagaagcccagggcatctgaagtcttg
aaatcaaacttagagccaagttcaagccaggcctatgtgacacagaaaacgtctgcactg
cagcgttcgaacacagattcggtggtggttctggaggaagggaacatgctgggcgctcgg
ccaaaggagagagcttcaccgacaggtatccaggaccgcgaggagtttgaagcagtgcaa
ccagagcccatttttatgggagacaaattcaacaatccccaggaagcctacagcagatct
tcatccagctcgagccaggaagatgataaaagcactcctctggaatatgtcggagggggt
gtcatccctattgagaaaggaatctttcaatctgctggggaccccatggaggaggaggag
gaggaggaggaggatctttctttccagccttcccaaaccatcaacaaatccagctcttcc
ctggagcttcagactctgcaggaggccttcaaagatgctgtgaacaaggaagaaaccgct
gcaggcaaactcagcattgaagcagaaccggggcccactgatgtaaatagccagttggaa
gcatcagcaggaggaggaggaggaggaggtgctggtgctggttttggtggtggtgccggg
gcaggtgcagctgctagtgccggggccatgcccagatccaggttggagtttccagctcca
cagccgaatctcgtctccccaggcggccacagaccccgcggacacacaatctcagggtcc
accccgtcgcattgggagaggaagatggatcacgattcctaccacagaggagctgcttcc
aactctgagaagatgtctgggatcagtcctagctttgtgtttcttcagctctaccattcg
cctttctttggaaatgaatccaacaaacctttactgctgcccaagtcccagctcgtggac
aggactgttaaagttctggatcaaatgcctccttatgacacccacaagattggagtcgtg
tatgttggagaagggcagatcaataatgaagtcgccatcctatcaaatgagtatggatcc
tacaggtatgcccagtttctgaccgggcttggcaagttgatccatctaaaagactgtgat
cctgatcagatattccttggcggtctggaccagtatggtgatgatggggagttcacatac
tgctggcacgatgacatcatgcagaccatatttcacatcgccaccctgatgccaaaccga
gagtccgataagggctgctgcaacaagaagaggcacatcgggaatgattttgtcatcgta
gtttacagcgacgcgggagaggaatacaaactcggaacaatcaagggtcagtttaacttt
gttgaagttataatcaagcctttggattatgagagcaatcttgttactcttcagtgtcgt
aaagatttagaaggactcgttgacataagtgtggctaagatcgtgtcagacaaaaactta
gctctgctggtacgacagatggccctgcatgctaatatggcttccctggttcatcagtac
aaatcaaacccatgcgatgcctatgcctcaaagtggctcgcaagactgcgacacatcaag
aagctgcggacacgggcccaacaggagatgcaatcacgccagacctccgggatctccctg
aaccaggcccacaccccgatgcagaacaagagctcccaccagcaggccggggcctcggag
ccggggcagcggaagcacctcgtctccacggtggatgacttcactgactttgtttga
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integrated database retrieval system
