Polyodon spathula (Mississippi paddlefish): 121331032
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Entry
121331032 CDS
T07273
Name
(RefSeq) post-GPI attachment to proteins factor 6-like
KO
K24576
transmembrane protein 8A/B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121331032
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Gene cluster
GFIT
Motif
Pfam:
DUF3522
TauE
EamA
DUF2613
Motif
Other DBs
NCBI-GeneID:
121331032
NCBI-ProteinID:
XP_041134070
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Position
18:complement(887955..899239)
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AA seq
766 aa
AA seq
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MKKSGPVCLLIAVFLTSCCAAADDLTYVSEFYSKVPQKLSRYSWYGNVRLLLFKVPQDSV
FVRWLFTASRGVGAACANTTVTIHIRAGAPPVINPLATQFSENAAFTRAHNFTLMLGSTG
PNMTFFNLTNPAVGDWFIAAHLPKDDGKIEPKGLSSSCSYFFQPQMFVRRVIDMPVLEPG
VPLQQTVSSPSKPAVLKVFIPVYTAEMTLWLGGCRTGNSTADSCPLVLTLGSAALTRFSP
KTVNCSGQAECPARLHSPPWESWVRITVESLNSNLSTSFQITAALTAGCKPKSSGLFGDF
LSRFSGVNGTGLFSNATLLVDNATALVQPQADSLLRSAPSGDSCLRSQPVFKEDVDVVSV
RFALINGPNISISSQAPTLISLNLNSGADSGGTLVLDLRLNQTSLTHENATVLVCVNAGS
PVLRLNESQSCTTAFSQGYSLRMNGTSPEAALHIPFPETAVWYLTLHTVCPADASACGKV
SGTVLTSSVLSACVNDCGTYGECRLLRSYGYLYAACTCKAGQRGWSCSDAREAQSYARQM
LAALLLTLSNLMFIPPIVVAVYRYHIVEASVYLFTMFFSTFYHACDQPGITVMCIMDYDT
LQYCDFLGSVSSIWVTILCMARIKDVFKYMLFILGTLVIAMSMQLDRRGMWNMLGPCLCA
GIAMLAAWVYRCVRRRQCYPTTWKRWLFFLLPGIVSAVIGISLYVFAQTDENYLYTHSAW
HMLVASSVVFLLPPREKHKKPWGWSQEAICGYQICKNEQEELYTVP
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagcggtcccgtgtgtctgctgatcgctgtttttctcaccagttgctgcgcc
gcagcagacgacttgacgtacgtctccgagttctactccaaggtgccccagaagctctcc
aggtacagctggtacgggaatgtgcgactcctcctcttcaaagtcccgcaggacagcgtc
ttcgtccggtggctatttactgccagccggggtgtgggagcagcctgcgcaaacacaact
gtaacaatccacattcgggccggagcccctccagttattaaccccctagcgactcagttt
tctgagaatgcagccttcactcgagcacacaacttcaccctgatgttaggctccacagga
ccaaacatgaccttcttcaacctcaccaatccagcagtgggcgactggttcatagctgca
catcttcccaaagatgacggtaaaattgagcccaaaggcttatcctcttcatgctcctac
tttttccagccccagatgtttgtgagacgggtgattgacatgcctgttttggagcctggt
gttcctcttcagcagacagtgtcctcccccagcaagcccgctgtgctcaaagtattcatc
cctgtgtacacggcggagatgaccctgtggctcggggggtgcaggacagggaacagcact
gcagactcctgcccgctcgtgctcaccctgggctccgctgccctcacccgcttctccccg
aaaacagtcaactgcagcgggcaagctgagtgtccagcccggctccactcccctccatgg
gagagctgggtccgaatcactgtggagagcctcaacagcaacctgtccacctccttccag
atcacagctgctctcacagctggatgtaagcctaaaagtagcggattgtttggtgacttc
ttatccagattcagcggtgtgaacggcactggtcttttcagcaacgccacgctgctggtg
gacaacgcaacggccctcgtccagccccaagccgacagtttgctgcgcagcgccccctct
ggggactcctgcctgcgcagccagcccgtgtttaaagaagacgtggacgtggtgtctgtg
cgcttcgctttgatcaacgggccgaacatcagcatctcttctcaggctcccactctcatc
tccttgaatttaaactctggagcagacagtggagggacgctggttctggacctgagatta
aaccagacttcacttacacatgaaaatgccactgttctggtctgcgtgaatgctgggtct
cctgtactgagactgaacgaatcacaaagctgcaccactgccttctctcagggttattct
ctcagaatgaatggaacatccccagaagctgcccttcacatccccttccctgagactgct
gtctggtacctcaccttgcacacagtgtgccctgcagatgccagtgcgtgtggaaaggtg
tcggggacggtgctgacttcctctgtgctgagtgcctgtgttaatgactgtggcacctat
ggagagtgtaggctgctccgatcctatgggtacctgtacgctgcctgcacttgtaaagca
gggcagagaggatggagctgcagcgatgccagagaagctcagtcctatgcgcggcagatg
ctggctgccctcctgctgaccctgagtaatctcatgttcatcccgcccatcgtggtggcg
gtgtaccgctaccacatcgtggaggcctctgtgtacctcttcaccatgttcttctcaacg
ttttaccatgcatgtgaccagccgggcatcactgtaatgtgcataatggattacgacaca
ctccagtactgcgatttccttgggtcagtctcgtctatttgggtgaccatcctctgcatg
gcaaggattaaggatgtctttaaatatatgctgttcatacttggcactctggtcattgcc
atgtctatgcaacttgatcgacgaggcatgtggaacatgctgggcccgtgcctctgcgct
ggtattgccatgctagcagcatgggtttaccgctgcgtccgaaggcgccagtgctacccc
acaacgtggaagcgctggctgttcttcctgctgccggggatagtgagcgcagtcatcggc
atttccttgtacgtctttgcgcagaccgatgagaactacttgtacacgcacagcgcttgg
cacatgctggtggcgagcagcgtggtcttcctgctgcctcccagggagaagcacaagaag
ccgtggggctggtcccaagaagccatctgtgggtatcagatctgtaagaacgagcaagag
gaactctacactgtcccctag
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