Polyodon spathula (Mississippi paddlefish): 121331055
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Entry
121331055 CDS
T07273
Name
(RefSeq) cilia- and flagella-associated protein 57-like
KO
K24729
cilia- and flagella-associated protein 57
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121331055
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121331055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_IP5PC_F
YabA
NBCH_WD40
Tropomyosin
CC4_CEP85
Beta-prop_IFT122_1st
Fez1
VPS11_N
DUF3618
Motif
Other DBs
NCBI-GeneID:
121331055
NCBI-ProteinID:
XP_041134129
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All DBs
Position
18:complement(35324291..35340707)
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AA seq
1214 aa
AA seq
DB search
MSAIVAQSHHIFGIRAGVTNNVFYFDEQTIIFPCGNNCLRYNIDQKWQKFIQGSEKSHGM
QALAISPNRRYLAVSERGEKGSITVYDLQQEQSKKRKVLTGGEVPVQEFLCMAFSPDSKY
LIAQSGAPDWTLFYWVWEKQKVMATMKTSSMSNPISQVSFNPQDNTQICITGNGVFKLFR
YAEGSLKQSSFQKLEGQNILCHAWVSEERVIAGTETAKLLVFESGDLRWEMSVEPASQEA
DRLRSSTEQHALSISHARVSAIVAYSKGFACSAGPGAVCLFEKTEEKDVYRKTREIRIPQ
DLHSHEPSHAEQQQFAALCISPSEETLVGSTDRGQLYSITLSSVEMSRGEQAKFEFLSYS
FHYGIITGLDICIRKPLIATCSLDRSVRIWNYETSSLELYKEFQEEAYSITLHPSGLFIL
VGFTDKLRLMNLLIDDIRTFREFTVRGCRECAFSNGGHLFAAVNGNIIHIYSSTTFENIL
NLKGHNGKVRSIVWSPDDSRLVSCGMDGAVYEWNTITSKRESESVLKSCSYTGITISPDA
KTFFAVGSDCTLKEITDSQILREVHSDDVAYTTVVMSHSGRMIFTGTATGTIRAMKYPLP
IQKEWNEYQGHAAPVTKMAITHDDQFLLTVCEHGCLYIWRIIDKEGRGLKREKEVIYAEE
ILITKSDLEEKNQVMTELKTRVEELKMENEYQLRLKDMNYNEKIKELTEKFIQEMESLKT
KNQVLKTEKDKQELNHEKEIADVVERHSKEQQDLESANNQKLMLEYEKYQELQMKSQRMQ
EEYEKQLHEMEESRTLALEELTEYYEAKLQDKLVLLDQCQDESRQQVREFDESKKQMEED
GDREIQDIRIKYERQLRDEKETSLRLKGETGLMRKKFSSLQREIDERMSEIERMKAEHNK
LQSVIKSLEKDIMGLKKEIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDYKIKELKKQ
IEPRENDIKEMKEQIQEMEVELERFLKLNTQLELNVTELKQKLKATDKEMHKNMTRVRNG
EALVKRFKTDLHTCVGFIQEPKKLKDCIRELYERYVQQSDVVEIVGVDADIQKEYARQRE
HLERTVASLQKKLTKDSEIHRADNIRIMQENVTLIREINELRRELKVTRTHLHDLEVETR
LNRKKGKQSSTEPRVRSTGDRSRTETRLNFEEEAERIIELQRLQIQRLRDQTHAQEQSYT
MRPLSGGKLPALTA
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattgtcgctcagtcccatcacatctttggcatccgagcaggagttacgaat
aatgttttctactttgatgaacaaactattatattcccgtgtgggaacaactgcttacgg
tacaacattgaccagaaatggcagaagtttatccaagggtcagagaaaagtcacgggatg
caggccctggccatcagccctaaccggcgttacctggcggtgtcggagagaggggagaag
gggagcatcactgtgtacgacctgcagcaggagcagagcaagaagaggaaggtgctgact
gggggagaggtcccggtgcaggagttcctctgcatggccttctcccccgattccaagtac
ctgattgcccagtccggagcgccagactggaccctcttctactgggtgtgggagaagcag
aaggtgatggccaccatgaagaccagcagcatgagcaaccccatcagccaggttagcttt
aaccctcaggacaacactcagatttgcatcactggcaacggggtgtttaaactgttccgc
tacgctgagggaagccttaaacagtccagctttcagaagctggaaggccagaacatcttg
tgccacgcctgggtgtcagaggagcgggttattgctggcacagagaccgctaaactctta
gtgtttgagtcgggagacctgcgctgggagatgagtgtagagcctgccagccaggaagca
gaccggttgcgctccagcacagagcagcatgccctgagcatttctcatgcccgggtctcc
gctatcgtcgcctattccaaagggtttgcgtgctccgctgggccaggtgcagtgtgtctg
ttcgagaagacagaggaaaaggatgtctataggaaaaccagggagatcaggattccccag
gacttgcacagtcacgagccgagccacgcagagcagcagcagtttgcagctctttgtatc
agcccctccgaggagaccctggttggcagtacagaccgtgggcagctctacagcatcacc
ctctcctccgtggagatgagcaggggggagcaggcaaagtttgagttcctgtcctactcc
tttcactacggcattatcactggcctggacatctgtatccgcaaaccgctgatcgccacc
tgctctctggaccgatccgtacgcatctggaactatgagaccagctctctggagctgtat
aaggagttccaggaggaggcttacagcatcaccctccacccgtccggtctcttcatactc
gtggggttcaccgacaagctgcgactcatgaacctgctgattgacgacatcaggacattc
agagagttcacagtgaggggctgcagggagtgtgctttcagtaatggggggcatctgttt
gcggcagtgaacggaaatatcatccatatctactcttcaacaacgtttgaaaacatcctc
aacctgaagggccacaacgggaaggtgcgttccattgtgtggagtcctgatgacagcagg
ctggtgtcctgtgggatggatggggcagtctatgaatggaacaccatcaccagcaaaagg
gagtcggagagcgtgctgaaatcctgcagctacaccggcatcaccatctcaccagatgcc
aagaccttctttgctgttggctctgactgtaccctgaaagaaattactgactcccagatc
ctgcgtgaagttcactctgatgatgttgcgtacaccactgtagtgatgtctcactcgggg
aggatgattttcactggcacagccacaggaaccatccgagctatgaaatacccgctgcca
atacagaaagagtggaatgagtatcagggccatgctgcacctgttacgaagatggccatc
acacacgatgaccagttcctgctcactgtatgcgagcatggatgcctgtatatctggagg
ataatcgataaggaagggcggggcttgaaacgagagaaggaggtcatctatgcggaggag
attctcatcaccaagtcagacctcgaggaaaagaaccaggtcatgacagaactgaagacc
agggttgaagagctgaaaatggagaatgagtaccagctcagactaaaggacatgaactac
aacgagaaaatcaaagagctgacggagaaattcatccaagaaatggagtcgctgaaaacc
aagaaccaggttctcaaaacggagaaggacaagcaggagctgaatcatgaaaaggagata
gccgatgtagtggagagacactccaaggagcagcaggacctggaatctgccaacaaccag
aagctgatgctggagtatgagaagtaccaggagctgcagatgaagtcccagcgaatgcag
gaggagtatgagaagcagctccacgagatggaggagagcaggaccctggcgctggaggag
ctgaccgagtattacgaggcaaagctgcaggataaactggtcctgctagaccagtgtcag
gatgagtcccggcagcaggttcgagagtttgatgagtccaagaagcagatggaggaggac
ggggaccgcgagatccaggacatcaggattaaatatgagcggcagctgagagacgagaaa
gagaccagtctccgactgaagggggagacgggcctcatgaggaaaaagttcagcagcttg
cagagggagattgatgaacggatgtcagaaatcgagaggatgaaggcagagcataataaa
ctgcagtcagtcatcaagtccctggagaaagacatcatggggctgaagaaagagatccag
gagagagacgagacgatccaggacaaggagaaacgcatatatgacctgaagaagaaaaac
caagagctggagaagttcaagtttgtgctggattataaaatcaaagaactgaagaagcag
attgaacccagggagaatgacattaaagaaatgaaagaacagatccaggagatggaggtg
gagttagagcgtttcctcaaactaaacacacagctggagctgaatgttaccgaactgaag
cagaagctgaaagccacagacaaggagatgcacaagaacatgaccagggtgcgaaacggg
gaggcgctagtgaagaggttcaagacagatctgcacacctgtgtggggttcattcaggag
cccaagaaactgaaggactgcatccgagagctctatgaaagatacgtccagcagtcagac
gtggtggagattgtgggagtcgatgcggatatccagaaagagtatgcacgccagagagag
cacctggagagaaccgtcgcctcgctgcagaaaaaactgaccaaggactcagagattcac
agggctgacaacatcagaatcatgcaggaaaacgtcacactaattagagaaatcaatgag
ctgaggcgggagctgaaggtgactcgaacacaccttcacgatctcgaggtagaaacccga
ctcaacagaaagaaagggaagcagagctccacagaacccagagtgcgctctaccggtgat
cgcagccgcacagagaccaggctgaacttcgaggaggaggcggagaggatcattgagctg
cagcggctgcagatccagcgtctccgagatcagacccacgcccaggagcagagctacacc
atgcggcccctgtctggaggcaaactccctgcactcacagcctga
DBGET
integrated database retrieval system
