Polyodon spathula (Mississippi paddlefish): 121331096
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Entry
121331096 CDS
T07273
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121331096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
Ank_5
Ank_3
NOD
Ank_4
EGF_3
cEGF
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
121331096
NCBI-ProteinID:
XP_041134200
LinkDB
All DBs
Position
18:complement(36244947..36292336)
Genome browser
AA seq
2436 aa
AA seq
DB search
MGIPRHDVGQILLILSWVCVSEALQCRGVKEPCINDGKCIPYNNGTGYCKCAAGYLGEYC
QHKDTCLPDTCRNRGNCTATVSGGVVRTACTCPLGFSGTICETPQPTACYPQNPCHNQGT
CRLLALDRWECVCPRGWTGKSCQRVDSCASQPCQHGGTCSALPRERFTCSCLPGYTGLTC
QTDIDECAARPAVCQNDGQCVNVPGSARCECRPGFSGKHCERVYVPCAPSPCLNGGTCRP
TSDVSYECSCLPGFNGTDCERNIDDCPQHRCQNGGTCVDGVNTYNCQCPPEWTGQFCTED
VDECRLQPNACQNGGTCSNRQGSYSCVCVNGWSGDDCSKNIDDCATAACAAGSTCIDRVA
SFVCNCPVGKTGLLCHVADACISNPCQEESMCDTNPLNGQYICTCPSGFKGAACTEDIDE
CTMNSNPCEHGGRCVNTDGSFRCDCALGYTGPRCEADVNECISMPCQNDATCLDQIGEFT
CICMPGFIGLHCEENIDECQSNPCLNSGRCTDQINRFMCDCPPGFSGVVCQVDIDECAST
PCHNGAKCIDRPNGYECDCAEGFTGLLCEGNIDDCDPEPCHHGHCQDGIATYTCVCDPGY
VGPICSEQVNECQSSPCQNEGRCIDLVNKYQCNCLPGTSGDNCENNFDECASSPCEYGIC
KDGLNRYDCVCTPGYTGPMCNIDINECASNPCHNGGTCLNELNSFRCLCPEGYRDPICYS
EVDECVSSPCVHGSCMDDVNGYRCECEPGWAGMDCELDRNECESNPCVNGGTCADLTNGY
SCTCRKGFKGSNCEININECASNPCLYQGTCIDGVSSYTCHCSLPYTGVNCEVILAPCDP
DPCTNSGICQASADYSSYSCLCAPGWQGQRCSQDINECVTNPCKNGAVCQNSQGSYQCQC
RPGYTGTNCETNIDDCTPNPCQNGGSCVDGVNSFSCSCLPGFHEAHCQTEVNECDSHPCL
NGATCNDYVNSYACQCTPGFNGIHCETNILECTDSSCLNNGTCVDGINKFSCRCRPGFAG
TVCQYQINECDSQPCQNGGTCMDRLGTYRCSCPAGYTGNNCQTLVNLCVTSLCNNGGTCV
QVGQSLRCECPSDWTGLYCDVPMVSCKMAAFHKRVSVDQVCQHSGTCINTGNTHQCQCQV
GYTGSYCELDVDECASNPCHHAARCQDLQGGYLCQCLAGYQGVSCEYEVDECQSQPCRNG
GTCFDLVNRFSCSCPPGTHGLQCEINDDDCAPDAHPSGGPRCFNGGQCIDGIGGYTCSCP
PGFAGQHCEGDVNECLSSPCDPKGSLDCVQKTNNYTCKCRDGFTGRHCQTVVDLCQLNPC
QNSGACSVDLNSPLGYVCHCRLGFVGNNCEYNRCGQIRCQNKQVCVETSSGPLCRCPEGP
EGARCENMGCANRPCRNGATCLAQPQPPYYQCQCPEHFDGRDCDIYSPQSPRVPRTDCQI
PQCAHKAGDDVCDTQCNTHECSWDSGDCSLHFPSPWKLCPPELRCWELFNNDMCDEQCNT
AECFFDSYECQSRGRTCKYQDYCINHYADRHCDQGCNTEECGWDGLDCSEDAPQRLEATL
VIVVLLQPEELLEELPHFLHTLGTLLHTNLRLKLDPQHRPMLYPYYGREDEDPTHSMSRG
RRSLELEREVVGSKVYLEIDNRQCVHNSNDCFSTTDQAAAFIAAQSAKGSLPLPVISVWS
QPEEDDSQKHYLYLLTLVGAVILGLLVLGVVVVKSKRKHGTLWVPEGFLPKKDRKRREPV
GQDDLGMKNLVTPQDEESMMYANQNERWLDDRPEAKKKKTEDQAFLPEGEGTVDRRQWTL
QHLEAADIRVTPSLALTPPQAQQELDCMDVNVRGPDGFTPLMLASLRVGGPDVSEEEEEE
DDSAANVITDLICQGATLVAQTDRTGETALHLAARYARADAAKRLLDSGADGNAKDNTGR
SPLHCAVAADAQGVFQILIRNRATDLDARMNDGTTPLILAARLAVEGMVEELINCHADVN
AVDDHGKSSLHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFQVAQVLLD
HFSNRDITDHMDRLPRDIAQERMHHDIVRLLDEYNVVRSPHGAGGHMVGVMCGPNGSFLS
LRQAPQGKKARRANTKTPGSNPSLGKDLKEVKGRRRKKSPGENKGHLSESSVTLSPVDSL
ESPHAYISDNSSHPHLTAPGAQQHPQHTLSLASLSHGSSTILPPVSHMLSQHGLGIGRMG
QHGPSEWMGLPSSGYGHMFGVLHHHQAAGSHPSMHQPMNITMAREQLPSIVSFQMMPNSA
SQQLVNQQQQQQHRPSPHAQNHCAQNMGGSLYQGSDMGHPAAQIPNNLMPQQDGQRAAAL
PQYQPLQSSVDKYPTPPSQHSYPSTSENTPGHGKQGPSEHPYLTPSPDSPDQWSSSSPHS
ASDWSDVTTSPTSMSQLQPSGAHIAEQQRSSMQAFA
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atggggatacccaggcacgatgtcgggcagattttactgattctgagctgggtctgcgtc
tcggaggctctgcaatgtcgaggagtgaaggagccctgtatcaatgatgggaaatgcatt
ccctacaacaacggcactggatactgcaagtgtgctgcaggttacctgggggagtactgc
cagcacaaggatacttgcctgcccgatacgtgcagaaacaggggcaactgcacagcgacg
gtgtcggggggcgtggtccgtacggcctgcacctgccccctgggtttctccgggaccatc
tgcgagaccccccagcccacagcctgctacccgcagaacccctgccacaaccagggcacc
tgccgtctcctggccctggacagatgggagtgtgtgtgtccgcgcggctggacaggcaag
agctgccagcgtgtggactcctgtgcctctcagccctgccagcacggaggcacctgctcc
gccctgccgagggagcgcttcacctgcagctgcctccccggctataccgggctcacctgc
cagacggacatcgacgagtgtgcagccaggccggcagtgtgccagaacgatggacagtgt
gtgaacgtgccagggagcgcccgctgcgagtgccggccgggcttcagcgggaagcactgt
gagagggtctatgtgccctgcgcaccctccccctgcctcaacgggggcacctgccggccc
accagcgatgtctcctatgagtgcagctgcctgccaggtttcaatgggacggactgtgaa
aggaacattgatgactgcccgcagcaccgttgccagaatggggggacctgcgtggacgga
gtgaacacctacaactgccagtgtcccccggagtggacaggtcagttctgcacagaggat
gtggacgagtgcaggctgcagcccaacgcctgtcagaatggagggacctgcagcaaccgg
caaggcagctacagctgcgtctgcgtcaacggctggagtggcgacgactgcagcaagaac
atcgatgactgcgccactgcagcctgtgcagcggggtccacatgcatcgaccgcgtggca
tccttcgtctgcaactgccccgtgggcaaaacaggtctcctgtgccacgtggcagatgct
tgtattagcaacccctgccaggaggagtcgatgtgtgacaccaaccccctaaatgggcag
tacatctgcacctgcccctcagggttcaaaggagccgcctgcacagaggacatcgatgaa
tgcaccatgaactctaacccctgtgagcacggcgggcgctgtgtgaacacggacggctcg
ttccgctgtgactgtgcgctcggctacaccgggccgcgctgcgaggctgacgtcaacgag
tgcatctccatgccctgtcagaacgacgccacctgcctggaccagatcggagagttcacc
tgcatctgtatgccagggttcatcgggctgcactgtgaggagaacatcgacgagtgccag
agtaacccgtgcctgaacagcggcaggtgcaccgaccagatcaacaggttcatgtgtgac
tgcccgccaggcttcagtggtgtggtgtgccaggtggacatcgatgagtgtgcgagcacg
ccgtgccacaacggagccaagtgcattgatcgacccaacggctacgagtgtgactgcgca
gaggggttcactggcttgctgtgtgaggggaacatcgatgactgtgatccggagccctgc
caccacgggcactgccaggatggcattgccacctacacgtgtgtgtgtgacccgggctac
gtgggacccatctgcagtgagcaggtcaacgagtgccagagcagcccctgccagaacgag
ggccgctgcatcgacctggtcaacaagtaccagtgcaactgcctgccaggcacctccggt
gacaactgtgagaataactttgatgagtgtgcgagcagcccctgtgaatatgggatctgc
aaggatggactgaaccgatacgactgcgtctgcactccgggatacacaggcccaatgtgc
aacatcgacatcaacgagtgcgcctcgaacccatgtcacaacggcggcacgtgcttgaac
gagctcaacagcttccgctgcctgtgtcccgagggttaccgggaccccatctgctactcc
gaggtggacgagtgcgtcagcagcccctgtgtccatggtagctgcatggacgacgtcaat
gggtacaggtgtgagtgtgaacctggctgggcagggatggactgcgagctggatcgcaat
gaatgtgaatcgaacccgtgtgtcaatggaggaacctgcgctgacctcaccaacggctac
agctgcacctgcaggaagggcttcaaagggtctaactgtgagattaatatcaacgagtgc
gcctcgaacccgtgcttgtaccaggggacctgcatcgatggagtcagcagctacacctgc
cattgctcactgccttacacaggtgtgaactgtgaagtcatccttgctccctgtgacccg
gatccctgcaccaactctgggatctgccaggcgtctgctgactactcgagctactcctgc
ctgtgtgcccccggctggcaaggtcagcgatgttcacaagacatcaacgaatgtgtcacc
aacccctgtaagaatggcgctgtgtgccagaacagccagggcagctaccagtgccaatgc
cgccctgggtacaccgggaccaactgcgagaccaacatcgatgactgcacgccaaatccg
tgccagaatgggggctcctgtgtggacggcgttaactcgttctcgtgctcctgcctgccg
gggttccacgaggcccactgccagacagaggtgaacgagtgcgacagccacccctgtctg
aacggagccacctgcaacgactatgtgaacagctacgcctgccagtgcaccccgggcttc
aacggcatccactgtgagaccaacatcctggagtgcacagacagctcctgtctcaataat
ggcacctgtgtggacgggatcaacaagttcagttgccgctgccggccgggcttcgcgggc
acggtgtgccagtaccagatcaacgagtgcgactcccagccctgtcagaacggcggcacc
tgtatggacaggctgggcacctatcgctgctcctgccctgcgggctacactggcaacaac
tgccagaccttggtcaacctgtgcgtcacgtctttgtgtaacaacgggggcacctgtgtg
caggtggggcagtccctgcggtgcgagtgtcccagtgactggactggcctgtactgtgac
gtgcccatggtctcctgcaagatggctgcttttcacaaacgtgtcagcgttgatcaggtg
tgccaacactctggaacatgcatcaatacgggcaacacccaccagtgccagtgccaggtg
ggctacaccggcagctactgtgagctggacgtggacgagtgcgcctcgaacccctgccac
catgccgctcgctgccaggatctgcaggggggctacctgtgccagtgcctggctgggtac
cagggggtgagctgtgagtacgaagtggacgagtgccagtcccagccctgcaggaatgga
ggcacgtgcttcgacctggtgaaccgattcagctgctcctgccctcccgggacacacggg
ctgcagtgtgagatcaacgatgatgactgtgctccagatgcccatcccagtggggggcca
cgctgcttcaatggagggcagtgcatcgatgggatcgggggctacacctgcagctgcccc
cctggctttgctggccagcactgtgagggcgatgtcaacgagtgtctgtccagcccctgt
gaccccaagggcagccttgactgcgtccagaaaaccaacaactacacatgcaagtgccgg
gacggcttcacagggcgtcactgtcagactgtcgtggacctgtgccagctgaacccgtgt
cagaacagtggggcgtgttctgttgacctcaactctccacttggctacgtctgccactgc
cgcttgggctttgttgggaataactgtgagtataaccgatgtgggcagatccgctgccag
aacaagcaggtttgtgtggagacctcgtcaggtccactgtgccgctgcccggagggaccc
gagggagctcggtgtgagaatatgggctgtgccaaccgaccctgcaggaacggggccacc
tgcctagcccagccccagccgccctactaccagtgccagtgcccggagcacttcgacggg
cgcgactgtgacatctactccccccaatctccccgggtacccagaacagactgccagatc
ccacagtgcgcccacaaggctggtgatgacgtctgcgacacgcagtgcaacacccacgag
tgcagctgggacagcggggactgctccctgcacttcccctccccctggaagctgtgcccc
cccgagctgcgctgctgggagctgttcaacaacgacatgtgtgacgagcagtgcaacact
gcagagtgcttcttcgacagctacgagtgccagagcagaggcaggacctgcaagtatcag
gattactgcatcaatcactacgctgacaggcactgtgaccagggctgcaacacagaggaa
tgtggctgggacgggctggactgctcggaggacgcgccccagcggctggaggccacactg
gtcatcgtggtgctgctgcagccggaggagcttctggaagagctgccccacttcctgcac
acgctgggcacgctgctccacacaaacctgcgcctcaagctggacccccagcacaggccc
atgctgtacccctactacggcagggaggacgaggatcccacccacagcatgagcaggggc
cggcgctccctggagctggagagggaggtcgtgggttctaaggtgtacctggagattgat
aaccgccagtgtgttcacaattccaatgactgcttttccacaacggaccaggctgctgca
ttcatagctgctcagtcagccaagggcagcctccctctcccagtcatctccgtctggagc
cagccggaggaggatgacagtcagaagcactacctgtacctgctgaccctggtgggggct
gtaatcctggggctcctggtcctgggcgtggtcgtggtgaagagcaagcgcaagcacggc
acgctctgggtccccgaggggttcctgcccaagaaggaccgcaagcgccgggagcctgtg
ggccaggatgatctcggaatgaagaacctggtgacaccacaagatgaagaaagcatgatg
tatgccaatcagaatgagcgctggcttgatgaccggcccgaagccaaaaagaaaaagact
gaggaccaggccttcctccctgaaggcgaggggacggtcgaccgccggcaatggacgctt
cagcacctggaggcggccgatatccgcgtgaccccctcgctggcactgactcccccgcag
gcccagcaggagctggactgcatggacgtcaatgtcaggggaccagacggcttcaccccc
ttgatgctggcatccttgcgagtgggtggtcccgatgtgtcagaggaggaggaggaggag
gacgactctgctgccaatgtaatcacagacctgatctgccagggagccaccctggtggcg
cagacggaccgcaccggcgagaccgcgctccacctggcagcccgctacgctcgggctgac
gctgccaagcgcctgctggactccggagcagacggcaacgccaaggacaacacaggtcgc
tcgccactgcattgcgctgtggcagccgacgcacaaggagtcttccagattctcatccgt
aaccgagccacagacctggatgcccgtatgaacgatggcaccaccccgctgatcctggcc
gctcgcctcgcggtggagggcatggtggaagagctcatcaactgccatgctgatgtcaac
gccgtggacgatcacggaaagtcgtctctgcactgggccgcagctgtcaacaatgtcgaa
gccacgctggtgctgctgaagaatggagccaaccgcgacatgcaggacaacaaggaggag
acccctctctttctcgccgcgcgggagggcagcttccaggtagctcaggtgctgctggat
cacttctccaaccgggacatcacagaccacatggaccggctgccccgggacattgcgcag
gagcgcatgcatcacgacattgtgcggctgctggacgagtacaacgtggtgcgcagtcct
cacggggcggggggacacatggtgggcgtcatgtgtggccccaacggttccttcctcagc
ctgcgccaagcccctcaggggaagaaggcaagacgcgccaacaccaagaccccaggcagc
aaccccagcctgggcaaggacctgaaagaggtcaagggccgtcgacggaagaaatctccg
ggagagaacaagggccacctgtcggagagctcagttaccctgtcccccgtcgactccctt
gaatctccccacgcctacatctcagacaacagctcccacccacacctgacagccccgggg
gcgcagcagcatccgcagcacaccctctctctcgctagcctgagtcacggctccagcacc
atactgccccctgtcagccacatgctgtcccagcacggcctgggcatagggaggatgggc
cagcacggcccctcagagtggatggggctgcccagctcgggctacggccacatgttcggg
gtcctccaccatcaccaagctgcgggttctcaccccagcatgcaccagcccatgaatatc
accatggcgagggagcagctgccgtcgatagtctcctttcaaatgatgccaaactcagcc
agccagcagcttgtgaatcagcagcagcagcagcagcacagaccttctccgcatgctcag
aaccactgtgcacagaacatgggcggctccctgtatcagggctctgatatgggccatcct
gctgcccagatacccaacaacctgatgccccagcaagatggccagagggcagcagcactc
cctcaataccaaccccttcagagctctgtggataaataccccacccccccatcgcagcac
agctacccctccacctcggagaacacgcccggtcacggcaagcagggcccgagcgagcac
ccctacctcaccccctcgccagattccccagaccaatggtccagctcctccccccactct
gcctccgactggtccgacgtcaccaccagccccacctccatgagccagctgcagcccagc
ggcgcccacattgccgagcagcagaggagcagcatgcaggcgtttgcatga
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