Polyodon spathula (Mississippi paddlefish): 121331149
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Entry
121331149 CDS
T07273
Name
(RefSeq) caskin-1-like
KO
K21952
CASK-interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121331149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121331149
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
121331149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Caskin1-CID
Caskin-Pro-rich
Ank_5
SAM_2
Ank_3
Caskin-tail
Ank_KRIT1
SH3_2
SAM_TNK
SH3_9
SH3_1
ANK_LRRK2
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
121331149
NCBI-ProteinID:
XP_041134296
LinkDB
All DBs
Position
18:4139554..4260706
Genome browser
AA seq
1451 aa
AA seq
DB search
MGKDQELLQAVKTEDLITVQKLLQRPKPGKAKLLGSTKRVNVNFQDTDGLSALHHAALNG
NMELISLLLEAQATVDIKDQKGMRPLHYAAWQGKVEPMKMLLKSGSSVNSQSDEGQIPLH
LAAQHGHYGVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSSMSAALLEPK
PGETTDPNSTSPLHQAAKNGHIDIIRLLLQAGIDINRLTHAGTALHEAALCGKTEVVRLL
LDNGINAQVRNTYSQTALDIVNQFTATQASKEIKQLLRDASAALLVRSMKDYCNNYDLTS
LNIKTGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSIVEVISKRTGSWNSVICTQQ
YQKIQISASSYGLGAVVNGETYHQFHYLPPPPLPPSHSHQPLFSSFGYHRSYSTSEELHG
GQGPRGSESSPHGSPTLATGSSAGANEEIWVLRKPFAGGDRSSVGSSGSMVSARSSGSGQ
SASSSVHALHAQAEGVKLLATVLSQSQKAKEHLAAEGSGKSLDQPAGSSRPQNVASCPYH
EQPHGDQPPQKKAETVSEGKSSGAVIHWLSEFQLQVYAPNFITSGYDISTISRMTPEDLM
AIGVTKPGHRKKITSEISKLNVAEWLPEHKPANLAEWLTMIGLGQYYQVLVHNGYENIDF
ITDITWEDLQEIGITKLGHQKKLMLAVKKLAEIQKAAEHGRGTLRRKAPQSLEVAAIESP
QQESAECLSPKMTTFQDSELCNELQVAVTHGGDSQDNIELKQASNQMPQRPQMSRSLHEN
SLSSKAKEPPVEGPAEEGGTPQRKEVRPMMQRANVPPVLGKPRQSFPPAGGPPYTPPQTP
TKPRPSSPQTMGVSQTTAKVKPTQQLLPQTDHPMSPRSLQQSPTHRGFAYVLPQPVEGGE
ANASHGTGVSPTLPVSVPVLCLPSQGDESDEEQGRPKKRAHSLNRYAMSDSERDREELMV
PDVAPYATVQRRVSRSHSVRGQSGDNNVNRSQSFALRPKKKGPPPPPPKRSSSAISSTNL
AGDFTGEGGGNELVVVYREQRRASDFGGMVDTGSAGSVKSIAAMLEMSSIGGGPKALALQ
KALGGSGIHYLQPSPEHGRVASVKHRDAIGLDGEVVNRRRTISGPVTGLIAAARRERVDT
ARSAKEPEPSKDKPQEDQPASQNSSSENIPFAKEGNLTIKQRPRKPEAGDSLPDSVYTLK
QEDISRVDANATLKRRVKSRHHPDGVKFHLTESSTVKRRPKTKEKDQTGSPQESQHFALY
QNGTGTIKRRPVSEMSGVESPVPHLVAEGHGDQGPRRDSLEAGDGETRKPVKPPVSPKPV
LTQPGTVKKQGPPTSTSKKAPIPGPGSPGGVPPASPQPSPQPSHHGVPVKPPRSSMGSTS
TDSTCPDTAQQKLEETSASLAAALQAVEDKIRQEEQHKADSSTEAKTTVSILDDIGSMFD
ELADQLDAMLE
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatcaggaattgctccaagcggtgaagactgaagatcttattacggtgcag
aagctcttgcagaggcccaagccggggaaagcaaagctgttaggctcaactaagagggtc
aacgtgaacttccaagacacagatgggttgtccgctttgcatcatgctgccctcaatggg
aacatggagcttatctccttgctgctggaggcacaggctacagtggatattaaggaccag
aaaggaatgcgtccactgcactatgcggcctggcagggtaaagttgagccaatgaagatg
ctgctgaagtcgggatcttctgtcaatagccaatcagatgaaggacagatccctctgcat
cttgcagcacagcacgggcattacggtgtttcagagatgcttctacagcatcagtccaat
ccgtgtatcgtggacaatgcaggaaagactcccttagacctggcctgtgaatttggaaga
gttggggtggtccagctgctgctgagcagcagcatgagcgctgctttgctggagcccaaa
ccgggtgagaccaccgaccccaacagcaccagccccctgcaccaggcagccaagaacggc
cacatcgacatcatcaggctgcttctgcaagctggcattgacatcaacaggctgacccat
gctggcaccgcactgcatgaggcagctctctgcgggaagacagaggtggtgcgcctgctg
ctggataatggtatcaatgcccaggtcaggaacacatacagccagacggccctggatatc
gttaaccagttcactgccacacaggccagcaaggagatcaagcagctgctcagagatgcc
tcggctgccctgctggtcaggtctatgaaggattattgtaacaactacgacctgaccagc
ctgaatatcaaaaccggagatgtcattacagtgttagagcagcaccctgatggccgatgg
aagggctgtatccatgacaacaggacaggaaatgatagagtgggatatttcccttccagc
atcgtggaggtgatcagtaagaggacaggttcatggaactctgtcatttgtacccaacag
tatcaaaagatacagatttctgcatcatcgtacggccttggcgccgtggttaatggcgaa
acttaccatcagttccattacttgccaccacctccacttcccccttcacattcccatcag
ccacttttcagttcctttggctatcacaggtcctatagtacttcagaagagctgcacggt
ggacaaggtccccgaggctcagaatccagtccacatggctcacccaccctggctacgggc
agctccgccggcgccaatgaggagatctgggttctgcgcaagcccttcgcaggcggtgat
cgcagcagtgtgggcagctcggggagcatggtcagtgcccgatcgtctgggagtggacag
agtgcaagcagcagcgtccacgcgctgcacgcccaggcagagggtgtcaagcttttggca
acagtcctgtcccagtcccagaaggcgaaggaacaccttgctgctgaaggttctggaaag
tctttggaccaacctgcagggtcctcgcgtccacagaacgtggccagctgcccctaccac
gagcagccacacggggaccagccaccacagaagaaagccgagacagtgtccgaggggaag
agctcaggggctgttatccattggctgagcgagtttcagctccaggtctacgctccaaac
ttcatcacttcgggttatgatatttccaccattagccgcatgacccccgaggatctcatg
gctatcggagtaaccaagcctggtcacaggaagaagattacttctgaaatcagcaagctg
aatgtggcagaatggcttcccgaacacaagcctgctaacttggctgaatggctgactatg
ataggcctcggccaatattatcaagtccttgtgcacaatggctatgagaacatagacttc
attacagacatcacctgggaggacctgcaggagattggcatcaccaaactaggccatcag
aagaagctcatgctggctgtgaagaagctggcagagatacagaaggcggcggagcacggt
cggggtaccctcaggaggaaggctcctcagtctctagaggtagcggccatcgagtcccct
cagcaggagtcggcagagtgcctgtcccccaagatgaccaccttccaggacagcgagctg
tgcaacgagctgcaggttgccgtgactcacggaggggactcccaggacaacatagagttg
aagcaagccagcaaccaaatgccccagcgaccccagatgtctcggagcctccacgagaac
agcctgagcagcaaggccaaggaaccaccagtggaggggcctgctgaggaggggggcact
ccccagaggaaggaagtgcggcccatgatgcagagggcaaacgtgccccctgtgctggga
aaacccaggcagtccttccctcctgctggaggtcctccttatacacctccccagaccccc
acaaaacccaggccgtcctccccacagactatgggggtttctcaaactacggccaaagtg
aagcccacccaacagctgcttccccagacagaccaccccatgtcccccaggtctctccaa
caatcccccacacaccggggcttcgcctatgtcttgccccagccagtagaaggaggtgaa
gcaaatgccagccatgggactggagtttctcccactctccctgtttccgtgccagtgctc
tgcctcccttcgcaaggggatgaatccgatgaggagcagggaaggccaaagaaacgggcc
cacagcttgaaccggtacgccatgtccgacagcgagagggaccgggaagagttaatggtg
ccagatgttgcgccttatgccaccgtgcagcggcgtgtgagcaggagccactctgtgaga
ggccagtctggggataataacgtcaaccgcagccagtccttcgccctccggcccaagaag
aagggcccgcctccccctccccccaagcgctccagctcagccatttcgagcacaaacctg
gcaggtgacttcactggggagggtggtggcaacgagctggtggtggtgtaccgggagcag
cggcgggccagtgacttcgggggcatggtggacacaggaagcgccggcagcgtgaagagc
atcgccgccatgttggaaatgtcctctatcgggggaggacccaaagctctggcactgcag
aaggctctcggtggcagtggcatacactatctgcagcccagtccggagcatgggcgagtg
gcctctgtgaagcaccgagacgcgatcggcctggacggggaagtggtcaaccggcggaga
accatcagcgggcccgtgactggactgattgcggcagcgcgcagagagagggtcgacacc
gcaagatccgccaaggaacccgagccctcgaaggataagcctcaagaggaccagccagct
tctcagaacagctccagtgagaatatccccttcgccaaagagggcaacctgaccatcaag
cagagacccaggaaaccggaggcgggcgacagcctgccagacagcgtgtacaccctgaaa
caggaagacatctccagagtggatgccaatgctaccctaaagagaagagtgaagtcaagg
catcacccagatggtgtgaaattccaccttaccgagtcaagcactgtgaagagacggcca
aaaaccaaggagaaggaccagacaggttccccgcaggagtctcagcactttgctctctat
cagaacggaacgggcactattaaacgaaggccagtgtcagagatgagtggggtggagagc
cccgtgccccacttggtggctgagggccatggtgaccaggggccccgcagagacagtctg
gaagctggtgacggagagaccaggaagcctgtcaagccgcctgtctcccccaaaccagtc
ctcacacaaccgggcactgtgaagaagcaaggacccccgacatccacttcaaagaaggct
cctatccccggacctggaagtccagggggggtccccccagcctcccctcagccctcccct
cagccctcccatcacggggtccctgtgaagcctcctcgctcctccatgggcagcacctcc
acagacagcacctgccctgacacagcgcaacagaaactggaggagaccagtgcctcactc
gctgctgccctgcaggctgtcgaggataagatcagacaggaagagcaacacaaagcagat
tccagcaccgaagcaaagaccacagtcagcatcctggatgacattggcagcatgttcgat
gaactagctgaccagctcgatgcgatgctggagtga
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integrated database retrieval system
