Polyodon spathula (Mississippi paddlefish): 121331279
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Entry
121331279 CDS
T07273
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121331279
03037 Cilium and associated proteins [BR:
pspa03037
]
121331279
Transporters [BR:
pspa02000
]
Other transporters
Pores ion channels [TC:
1
]
121331279
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121331279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121331279
NCBI-ProteinID:
XP_041134496
LinkDB
All DBs
Position
18:7634705..7662542
Genome browser
AA seq
959 aa
AA seq
DB search
MSQQNRDGVLNPAYHHSETLEMDRGSPQRSQHQNPYAGDDFRPQRDGVPAGRGGPEVLPP
YDMERGPWITTDTIPMRPLPSEQDFGGPYRSPFPQDRSGFANPGFEWEPANENSLAPPGW
QRNSLEGHQEYRQGGEQQPFTGPHSQSLGLPSQGESLVRQRGVRRYSQFPAGTLSSSALQ
RLGFKGDEFQDVLEEERQDLIRELAAMSSRDCVQAVRQLPMNLQEKDQIRKAVLLMKTSK
KQRQEWNCCMDWTQNVSMSFRRCGASLSAVLQALQLWQGTLKEIGSKFGTSVLSYFLFLK
WLLMFNIFSFLVNFGFITVPQLLDHEAKNTGTFRGLEILTGAGYFSDSVLYYGFYSNGTV
SGGSASGNSTSSMPQYNMQLAYFFTIVAYLVLCCISLVYSAARSFRKNFMLAGAEVSNAG
RLLSSWDFSVSNEKAVRLRQDNLRTQLKESLAEKINENLSLTFSQKLARFGIHVAAWLAS
TGMAAGCCAGVYFLSRYNMNLINKSPASQSLTAEAGTLLLPIVVSLINLVIPLLYSLFKK
VEPFTFPWHQIYALIIRNVLLKMSILAMLCYFWLEQVVENDNINCWETFVGQDIYRLIII
DFIFCLLGSFFGEFLHNVIGTKCLSSLGVPEFDIARNVLDLIYAQTLAWIGIFFSPLLPA
IQIVKLFLIFYLKKVSLMQNCHPPKRSWRAAQMMTAFILLLFFPSFSGALSVVALTVWRR
APSKTCGPFRGLAVPYDAVSQWMDSVDIDFHGSSWAVWIYNNLIKSVLFFLIITLLVLIL
IYLYSQIVAGHKVLIILLQEQISNEGKDKIFLLEKIEKLKAQSSARTALASDREAQRGGA
EVSRHTGSRGFQRSQRRSQDQSSRGLERGRVLTVDQDSRSSGRGRMPEYEPRSRGRDTAL
PGYVQEGLLGSERGYPGRANYLQEAPYSQEDGTAPPVPSALVQALLARRQAEEEDEEGY
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcaaaacagggatggggtgttgaaccctgcgtatcaccactccgagaccctg
gagatggacagaggctcacctcagaggtcacaacaccagaacccctatgcaggtgacgac
ttcaggccacagcgggacggggtaccggcagggaggggcggcccggaggtgttgcccccc
tacgatatggagcggggcccctggataactacagataccatcccaatgagacccctaccg
tctgaacaggattttggtggaccgtaccgctccccatttccccaggaccgcagcgggttt
gctaacccagggtttgagtgggaaccagccaatgagaacagtttggcacccccaggctgg
cagcgaaactcccttgagggccatcaagaatacagacaaggaggtgaacaacagcccttc
actggaccccattcccagtcccttggactaccttcccaaggagagagcttggtgcggcag
cgaggagtacggaggtacagccagttccctgctggaacgctgagcagctccgcacttcaa
aggctgggatttaaaggggatgagtttcaggatgtgttggaggaagagagacaggatctg
atcagagagctggctgccatgtcctccagggattgtgtccaagctgttcgccaactaccc
atgaacctccaggagaaggaccagatcaggaaggcagtgctgcttatgaagacgtctaag
aaacagcggcaggaatggaactgctgtatggactggacacaaaatgtttcaatgtctttt
aggagatgcggtgccagcctctctgccgtgctccaggctcttcagctctggcagggcacc
ctgaaggagatcgggagcaagtttggcaccagtgtcctctcctacttcctctttctaaaa
tggctgctcatgttcaacatcttctccttcctggttaacttcggcttcatcactgtgcca
cagctgcttgaccacgaggccaagaacaccgggaccttccgggggctggagatactgact
ggagctggttatttcagcgactctgtactgtattacggtttctactctaacggcacagtg
tctgggggcagtgctagcggtaactccacgtccagtatgcctcaatacaacatgcagctg
gcatacttcttcaccatcgtagcctacctggttctgtgctgcatcagccttgtctacagc
gctgcacgctcgtttcggaagaacttcatgctggctggggctgaggtcagcaatgctggg
aggctgctgagcagctgggatttcagcgtgagcaatgaaaaagctgtgcgtctgaggcag
gacaacctgcgcacacagctcaaggagtcactggctgagaaaatcaatgagaatctttcg
ctcacgttctcccagaaactcgctcgctttgggatccacgtggccgcttggcttgcttcc
acagggatggctgcaggctgctgtgccggcgtctacttcctgtctcgctacaacatgaat
ttgatcaataagtcccctgcatcccagagcctgacagccgaggcagggactctgctcctt
cccattgtggtgtccctcattaacctggtcatcccactcctctactccctgttcaagaag
gtggagcccttcaccttcccctggcaccagatctacgctctcatcattaggaacgttctt
ctgaagatgtccatcttggctatgctctgctacttctggctggaacaagttgtggaaaac
gataacataaattgctgggagacgttcgtggggcaggatatctacaggctcatcatcatc
gacttcattttctgtctcctgggctccttcttcggggagttcctgcacaatgtgatcggg
acaaagtgcctgagtagtctaggagttccagagtttgacattgcacggaacgttctagac
ttgatctacgcacagactctagcctggattgggattttcttctctccgctgctgcctgcc
attcagattgtaaaactcttcctgatcttttaccttaaaaaggtgagcttgatgcagaac
tgccaccctcctaagagatcgtggcgggcggctcagatgatgaccgccttcatcctcctc
ctcttcttcccgtccttctctggggcgctgtccgtggtggcattaactgtctggaggaga
gccccctctaagacctgtggcccgttccgagggctggctgtcccctacgatgctgtgtct
cagtggatggattcagtggatatcgacttccatgggtccagttgggctgtgtggatctac
aataacctgatcaagagcgttctgttcttcctcatcatcacactcctcgtcttaattctg
atctacctctactcacagatcgtagcgggacacaaagtcctcatcatccttcttcaggag
cagatctctaacgaggggaaggataagattttcctgttggagaagatagagaagctgaag
gctcagagcagcgctcgaaccgcactagcctctgacagagaagcacagagaggaggggca
gaggtgagtcgccacaccggttcgagaggtttccaaaggagccagagaaggagtcaggat
cagagttcaagaggcttagagagagggagggtgttaactgttgaccaggattcaagaagc
tctggaaggggcaggatgccggaatatgagccgcgctccagaggacgggatacagcattg
cctggatatgtacaggagggcctgctgggctcggagagaggatatccaggaagagccaat
tatctgcaggaagctccgtactcccaggaagacggcacagcaccccctgtccccagcgca
ctggtgcaggctcttctagcccggaggcaggctgaggaagaggatgaagagggatattaa
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