Pseudogemmatithrix spongiicola: Strain318_000157
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Entry
Strain318_000157 CDS
T10301
Name
(GenBank) Ig-like domain-containing protein
Organism
pspc Pseudogemmatithrix spongiicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_1
WD40_RLD
RCC1_2
RCC1
MG4
Invasin_D3
CarboxypepD_reg
Alsin_RLD
Motif
Other DBs
NCBI-ProteinID:
WKW13833
UniProt:
A0AA49JS20
LinkDB
All DBs
Position
158133..162287
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AA seq
1384 aa
AA seq
DB search
MQASHRSLSQRLGARPFFLGALALLIGISCKEVTGPEDSAVGLTVIAGDNQAGRVSSDLD
DPIVVRVTNRSGAGVKGATVLFSPDSGSGAPTPLVATTDSTGVASVRWRLGPALGPMRLT
ASFADLTPVTVTATAVPDRVEVVSGDAQQTRVTGTLSQPLVVRVTDFQGRTVQGISVSFT
PDSGSGTVAPALIATDAQGLARATWTLGNAAGAMRVVATVATSSPVEFSAIANQDVLNLA
SGGDQGARAGTTLPRPVQVRVTDQNGTPVANVIVNFEPGTGSGTVSPVSAQSNAQGIVQT
NWTLGATPGAQTLTARSNFASPITVNAAGLLPSEILVVSGNQQITRVSTPVPSSLVVLVT
DSTGRRVPGAQVRFVPDSGSGTVDPAIATTDTLGQANARWTLGASVGVMRLRAISGSDTL
VFQATTTADLLTVTAGNGQTGRFGAALGTPLAVTARDLAGNTVAGVVVTFTPDAGSGTVA
PASVTTDATGVARTLWTLGAAPGPMRVVASAATAAQSVEIRATASGDNLTVASGSGQAAA
ANAALPAPVVMQVRRADGTPVSGVTLTFAPEAGNGTVAPTTATTDANGRAQTVWTLGAAA
GTQVLNVSSGTTLPTTVTATARTAASIAVTGDGQSARFGTALTNPIVATLTDLDGNAVAG
ATVTFTPDAGSGTLAATSVTTDALGRASTTWTLGGTPGAMRVTVSATGATSQIVNATATG
DAIALEAGGGLSALVGTALSPAVRVRVTNAANEPQSNVLVTFAPTTGSGTVSADTVRTDS
FGRAQVTWTLGAARGPMTLNVTTPVTQLLAVSATALAADAIALDTQGSLSGFVGTALDST
VRVRVTDRGGAVVPGVSVSFAPSAGSVSAATATTNASGIASVRWTLGTTPGAQTLAASVG
ASPTVNVSATARVDSSRAISVQSGDAQDTTLTKALGAPLVVRVLDRFGNAVQGATIDWTG
TNGVTFSSSSSTTNASGDASVTVTTGTTLGAASVTATVSGRTESRTFTLTTQAAFTSVWA
GNYFTCGLAERGEAYCWGFNQNKQLGSSATEDATNAPKLPVTSGSQIPVFRKIDGGENHG
CGVTIARQAMCWGLGQGSFGVSTPTVINLANASIIEDVTVGSGHSCLLTASGTVACVGDN
LRGQLGINTVAANATPYTPVDSSYSAVSAGGLHTCGMVRGSGRLMCWGDNQVGQVGDGTT
TPRLLVPTPVSVGGGVTWDTTSLVTGDSHSCALNSAGQAICWGANGYGQLGNGTTALSRD
TALVAGGLTFRRLAAGRDHTCGFTTTDSTAYCWGRNDAGQLGDSTTTNRSSPTAVRGGLK
FRSIATGEFHSCGVASNASMTQNTLATRDLLYCWGDSEYGQAGTGVFEPNNTPILTPRRV
SHQP
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctcccaccgctcgctctcgcagcgcctcggcgcgcgccccttcttcctcggc
gcgcttgccctcctcatcggcatctcgtgcaaggaagtcacgggacctgaagactctgcg
gtcggcttgacggtgatcgccggcgacaaccaagcaggccgcgtgagcagcgatctcgac
gatcccatcgtcgtgcgcgtgacgaatcgcagcggcgcgggcgtgaagggcgccaccgtg
ctcttcagtcccgactccggcagcggcgcgccgactccgctcgtcgcgacgacggacagc
acaggcgttgccagcgtgcgctggcgcctcggccccgcgctcggccccatgcggctcacg
gcgtcgttcgcggatctcacgccggtgacggtgaccgcgacggccgtgccggatcgcgtc
gaagtggtgagcggtgacgcgcagcagacgcgcgtgacgggcacgctgtcgcagccgctc
gtcgtgcgcgtgacggacttccagggccgcacggtgcagggcatctcggtgtccttcacg
cccgactcgggcagcggcacggtcgcccccgcgttgatcgcgacggacgcacaaggcctc
gcacgcgcgacctggacgctcggcaacgccgccggtgccatgcgtgtggtggcgaccgtc
gcgacgagctcgccggtcgagttcagcgccatcgccaaccaggacgtgctcaacctcgcg
tccggcggcgatcaaggcgcgcgcgctggcacgacgctgccgcggccggtgcaggtgcgg
gtgacggaccagaacggcacgcccgtcgcgaacgtgatcgtgaacttcgagcccgggacg
gggagcgggacggtgagccccgtgagcgcgcagtcgaacgcgcagggcatcgtgcagacc
aattggacgctgggcgcgacgcccggcgcgcagacactgaccgcgcgttccaacttcgcg
tcgccgatcacggtgaacgcggcgggcctgctgccgagtgagatcctcgtggtgagcggc
aaccagcagatcacgcgcgtgagcacgccggtgccgagcagcttggtggtgttggtgacg
gactcgacgggtcgtcgtgtgccgggcgcgcaggtgcgcttcgtgccggattccggcagc
ggcacggtggatccggcgattgcgacgacggacacgctgggtcaggcgaacgcgcgctgg
acactgggcgcgagcgtcggcgtgatgcgactgcgtgcgatctccggttcagatacgctg
gtgttccaggcgacgacgacggcagacctgctgacggtgacggctggcaacggccagacg
ggtcgcttcggtgccgcgctgggcacgccgctggcagtgacggcgcgtgacctcgcgggc
aatacggtggcaggtgtggtggtgacgttcacgccggatgcgggcagcggcacggtggcg
ccggcgtcggtgacgacggacgccacgggtgtggcgcgcacgctgtggacgctgggtgct
gcgccgggtccgatgcgcgtggtcgcgtcggcggcgacggcggcgcagtcggtggagatt
cgcgcgacggcgtcgggtgacaacctcacggtggccagcggcagcggtcaggcggcggct
gcaaacgcggcactgcccgcgccggtcgtgatgcaggtacgtcgcgccgacggcactccg
gtgtctggcgtgacgctgacgttcgcgcccgaggccggcaacggcacggtggcgccgacg
acggcgacgacggatgcgaatggacgcgcgcagacggtgtggacgctgggtgccgcggcc
ggcacgcaggtcctgaacgtgtcatcgggcacgacgctgccgacgacggtgacggcgacc
gcgcgtaccgcggcctcgattgccgtgacgggggatggccagtcggcgcgcttcgggacg
gcgctgacgaatccgatcgtcgcgacgctgactgacctcgatggcaatgcggttgcgggc
gcgaccgtgacgttcacgccggatgcgggaagcggcacgctggccgccacctcggtgacg
actgacgcactgggccgcgcctcgacgacctggacgctcggcggcacgccgggcgcgatg
cgcgtgacggtaagcgcgacgggcgcgacttcgcagatcgtcaacgctacggcgacgggt
gatgccatcgcgctcgaagcgggcggcggcctctcggccctcgtgggcacggcgctgagc
ccggccgtgcgtgtgcgcgtgaccaatgcggccaacgaaccgcaatcgaatgtgctcgtg
acgttcgccccgaccacgggcagcggcacggtctccgcggatacggtgcgtacggacagc
tttggccgtgcgcaggtgacgtggacgctcggtgccgcgcgcggaccgatgacgttgaac
gtgacgacccctgtgacgcagctgctggcggtgagcgcgaccgcgctggcggccgacgcg
attgcgttggatacgcagggctcgctgagcggcttcgtgggcaccgcgctggattcgacg
gtgcgcgtgcgtgtgacggatcgcggcggcgctgtggtgccgggtgtgtcggtgagcttt
gcgccgagcgctggctcggtgagcgcggcgacggcgacgacgaatgcgagcggcatcgcg
tcggtgcgctggacgctgggcacgacgcctggggcgcagaccttggcggcatcggtgggc
gcgagcccgacggtgaacgtgtcggcgacggcgcgggtggattcgagccgggcgatcagc
gtgcagtcgggtgatgcccaggacacgacgctgacgaaggcgctcggtgcgccgctggtg
gtgcgtgtgctggaccgctttggcaacgcggtgcagggtgcgacgattgactggaccggc
acgaacggcgtgacgttctcgtcgtcgagctcgacgacgaacgccagtggcgacgccagc
gtgacggtcacgacgggaacgacgcttggtgcggcaagcgtgacggcgacggtgtcgggt
cgaaccgagtcccgaacgttcacgttgacgacgcaggcggcgttcacgagcgtgtgggcg
ggcaactacttcacctgcggcctagccgagcgcggcgaggcgtattgctggggcttcaac
cagaacaagcagctcgggtcgtcggcgacggaggatgccaccaacgcgccaaagctgccg
gtaacatcggggtcgcagattccggtgttccgaaagattgatggcggcgagaaccacggc
tgcggcgtcacgatcgcccgtcaggccatgtgctgggggctcgggcagggcagcttcggc
gtctcgaccccgacggtcatcaatctcgccaatgcttcaatcattgaggatgtcacggta
ggtagcggacatagctgcctcctgacggccagcggaaccgtagcgtgcgtcggcgacaat
cttcgcggacagcttggcatcaacacggtcgccgcgaacgcaacgccgtacacaccagtg
gacagcagctactctgccgtgtcggcgggcggcctgcacacctgcggtatggtgcgtggt
tccggacgcctgatgtgctggggtgacaatcaggtcggccaggtgggcgatggcacaacc
acgccgcgcctgctcgtgccaacccctgtcagcgtcggcggtggcgtcacgtgggatacg
acgagcctcgtcacgggcgactcacacagctgtgccctgaactctgcgggccaggcgatt
tgttggggagcgaacggttacggccaactgggtaatggaaccacggcgttgagccgtgat
acggcactcgtggccggcgggttgaccttccgccgcctcgcagctggccgcgaccacact
tgtggctttacgacaacggactcgacggcatactgttgggggcggaacgatgctgggcag
ctgggcgacagcacgactacaaaccgcagcagcccgacagctgtgaggggaggtctaaag
ttccgttcgattgcgaccggcgaattccattcatgtggcgtggcatccaatgccagcatg
acgcagaacaccctggcgacccgcgatctgttgtattgctggggtgacagcgagtatggg
caggccggcaccggtgtctttgaaccgaacaacactccgatactgacgccaagacgcgtc
tcgcaccaaccatag
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