Pseudogemmatithrix spongiicola: Strain318_000266
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Entry
Strain318_000266 CDS
T10301
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
pspc Pseudogemmatithrix spongiicola
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WKW13942
UniProt:
A0AA49JXM3
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Position
282498..285509
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AA seq
1003 aa
AA seq
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MIRAAVTRPAVVWAASVAICLGGAVSFTRLALATRTTVELPRLQISSSWQGASAELVEMY
ISSPVEAAAQGVRGVRRTNSESRDGTSRITVELDPKANVQMTRLAILERLELLRGDFPLG
ATQPYVGNLVPEALQEPPLLRVLLNGPYTPGALQRIADEVLNPRLSAVNGVSAVSVQGGT
EFGASVSYDPLLLRQVGIDPQALSTAVRESRVVAALGTERLGASRREVVLRDQPDALEEL
NDLPIRGRGGRVFRLGDLAEVRPEEDTQGRFFRVNGNTALALTVTREAGADAIKTAKAVR
AAMREVTAELPPGITWKVTADESVELERQLNDLMLRGAIAFAAVALVLAIALRNWRAVAL
VMGSAAVAIAGTALGLFLLEIPANMLTLAGLGMGIGVLVQNGLVVVERLRSAPDTPEGRA
QVAARMVPAVVGTTLTTAVVLFPFLYLQGNARAAFFPFAAAFTLGLFWSVLSALVMVPAL
AAGHGLKETHWPRAQRIYGWMLKKTLRWRYVTIVLSLATVSGLGWVFVKKIPRFSFSGFG
VQRNSVSVSISFPRGSDPASLDAAMREMEAVVVGRPGIEEVIAQNSGQFGAGMRVSFTPD
AEATAIPLEVQEALTARAVYVGGASIFVAGQGPAFSSGGGGGSSANFRIRVLGYSYAAVA
ELAEDIRSRLERITRVRNAVVTSGSFFGSDRAFAVTLDPDRDALARYGVTAATFTGAVAR
EVRGPVGGQRLEIGGEEIPVSVKTQGARERSLDQLRDALVPTATGTPARIADLSDVDERE
QLATVTREDQRYLRVVAYEFRGPNRLAQRTHDAFMKSISVPPGFTVEDQQFFQNNQDTSQ
KGLWLVFAIGVTLVILAVAMVFDSAWGAAMVFLSLPIALGGVVAAFWAADAAFTREAAVG
VILVVGLAVNQSILLVDAALERRGKSGGRLRAAQVYQAALDRSGMIVMVTLTTIASLVPL
AVGTSATTLFGAIALATAGGTVAGTLGAMLILPALLARLRRRA
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgcgctgcggtaacgcgtccggccgtggtgtgggcggcctccgtggccatctgc
ctcggtggcgccgtctcgttcacgcgattggcgctggccacgcgcacgacggtggagctg
ccgcggctgcagatctcgtcctcgtggcagggcgcgtccgcggaactggtggagatgtac
atctcgtcgccggtggaagcggcggcgcagggcgtgcgcggcgtacgccggaccaacagc
gagtcgcgcgacggcacgtcgcgcatcacggtggagctggacccgaaggcgaacgtgcag
atgacgcgcctcgcgatcctcgagcggctggagctgctgcgtggggacttcccgctcggc
gcgacgcagccctacgtgggcaacctcgtgcccgaggcgctgcaggagccgcccctgctg
cgcgtactcctgaacggaccgtacacgccgggcgcgctgcagcgcatcgccgacgaagtg
ctgaatccgcgcttgagcgcggtgaacggcgtcagcgccgtcagcgtgcagggcggcacg
gagttcggtgcgagcgtgagctacgatccactcctcctgcgtcaggtcggcatcgacccg
caggcgctttcgacggcggtgcgcgagagccgcgtggtcgcggcgctcggcaccgaacgg
ctcggcgcgagtcgacgcgaggtggtgctgcgcgaccagccggatgcactcgaggaactg
aacgacttgccgatccgcggccgcggcggccgcgtgttccgtctcggtgacctcgccgag
gtgcggccggaggaagacacgcagggtcggttcttccgcgtgaacggcaacacggcgttg
gcgttgacggtgacgcgcgaggcgggtgcggacgccatcaagacggcgaaggccgtgcgc
gccgcgatgcgcgaggtgacggccgagctgccgccgggcatcacgtggaaggtcacggcc
gacgagtccgtggagttggagcgccaactgaatgacctgatgctgcgcggcgcgatcgcc
ttcgcggccgtggcgttggtgttggcgatcgccctgcgcaactggcgcgcggtggcgctg
gtgatgggttcggcggcggtggcgatcgccggtacggcactgggcctgttcctgctggag
atcccggcgaacatgctcaccctcgccgggctcggtatgggcatcggcgtgttggtgcag
aacgggctcgtggtggtggagcgcctacgcagcgcccccgacacgccggagggccgcgcg
caggtggcagcgcgcatggtgccagccgtggtcggcacgacgctcacgacggccgtggtg
ctgttccccttcctgtatctccagggcaatgcgcgcgccgcattcttcccgttcgccgcg
gcgttcacgctggggctgttctggtcggtgctctcggcgctggtcatggtgccggcgttg
gcggcgggtcacgggctgaaggagacgcactggccgcgcgcgcagcgcatctacggctgg
atgctcaagaagacgctgcgctggcgctacgtgacgatcgtcctttcgctggcgacggtg
agcggcttgggctgggtgttcgtgaagaagatcccgcggttctcgttcagcggattcggc
gtgcagcgcaatagcgtctccgtgagcatcagcttcccacgcgggtcggatccggcgtcg
ctggatgccgcgatgcgcgagatggaagcggtggtcgtggggcgccctggcatcgaggaa
gtgatcgcgcagaactccggccagttcggcgcgggcatgcgggtgagcttcacgcccgat
gccgaggcgacggcgatcccgctggaggtccaggaggcgttgaccgcgcgcgcggtgtac
gtgggcggcgcgagcatcttcgtggcggggcagggaccggcgttcagctcggggggcggg
ggcggctcgagtgcgaacttccgcatccgcgtgctgggctactcgtacgcggcagtggcc
gagctcgcggaagacatccgctcgcggctcgagcgcatcacgcgcgtgcggaacgccgtc
gtgacgagcggcagcttcttcggcagcgaccgggcgttcgcggtgacgctggatcccgat
cgcgatgcattggcacgctacggcgtgacggcggcgacgtttacgggtgcggtcgcgcga
gaggtgcgcggcccggtgggcgggcagcgcctggagatcggcggtgaggagatcccagtc
agtgtgaagacgcagggcgcgcgcgagcgttcactggaccagctccgcgatgcgctggtg
ccgacggcgacgggcacgccggcgcgcatcgccgacctctcggacgtcgacgagcgcgag
cagctggccacggtgacgcgcgaggaccagcgctacctgcgcgtggtcgcctacgagttc
cgcgggccgaatcgccttgcgcagcgcacgcacgacgcgttcatgaagagcatcagcgtg
ccgccgggcttcacggtggaggaccagcagttcttccagaacaaccaggacacgagccag
aagggcctgtggctggtgttcgccatcggcgtgacgctggtgatcctggcggtggcgatg
gtcttcgactcggcgtggggcgcggcgatggtgttcctctcgctgccgatcgcgttgggc
ggcgtcgtggcggcgttctgggccgccgatgcggcgttcacgcgtgaggccgcggtgggg
gtgatcctcgtcgtcggtctggcggtgaaccagagtattctcttggtggacgccgcgctc
gagcggcgcgggaagagcggtggcaggctgcgcgcggcgcaggtgtatcaggcggcgctg
gaccgttcggggatgatcgtcatggtcacgctcacgaccatcgcgtcgctagtcccgctc
gcggtcggcacgagcgccacgacgctgttcggggccatcgcgctcgcgaccgcaggcggc
acggtggcgggcacgctcggcgcgatgctcatcctgccggcgttgctggcgaggctccgg
cggcgcgcctag
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