Pseudogemmatithrix spongiicola: Strain318_000318
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Entry
Strain318_000318 CDS
T10301
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Strain318_000318
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GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
OEP
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
WKW13993
UniProt:
A0AA49Q638
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Position
complement(353190..354917)
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AA seq
575 aa
AA seq
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MSPRRLSLAFLAALGLVAACGKKAAAPLRISTAPIERRTIIVQAEATGIIEPINVVEVKS
RASGQIIEMPVETGSLINPGELIVQLDTRDVQNQFDQSKADLESAQASLAVAEQNKKRSD
ELFRSQIITAQENEQAGLTYQNALSQIVRARTNLDLAQQRLDDARVVAPVRGTVIEKPVA
LGQVIQSGTQAVGGGTTIIKMADLTKVRARALVNETDIGRVMQGQEATVIVDAFPDRPFR
GTVEKIEPQAVVQQNVTMFPVLVSLENREGLLLPGMNGEVSIISDRRENVIAVPNEAIRS
VREVAQVAGLLGLNADSVQAQLRSAMGGGFGGGAPMGMNGGARPQGGPPAGGAQARPGYA
DFSAQQGGRQGGQGGFQMPDVTDAQCKAVADARAAKPAVARRLDSLQTAMRSNDADRPAL
MGGIRAAYTELGVDAMVARACLARQQGGGARTAGPAAPTGQPTPARNGPRALQAPGAQTG
GAARNGGSRAGSRSGLVFVQKADSTWEPRMVRLGVADYDYTEVLSGLEEGEQVALLSAVA
LQAQRQENQDRMRAMTGGASPLGGAPAGPGGGRPR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccccgccgcctttccctcgccttcctcgccgccctcggcctcgtcgccgcctgc
ggcaagaaggccgccgcgccgctccgcatctccacggcgcccatcgagcgtcgcaccatc
atcgtccaggcggaagccacgggcatcatcgagccgatcaacgtcgtcgaggtgaagtcc
cgcgcctccggccagatcatcgagatgcccgtcgagacgggctcgctcatcaaccccggc
gagctgatcgtccagctcgacacgcgcgacgtgcagaaccagttcgaccagtcgaaggcc
gacctggagtccgcgcaggcctcgctggccgtggccgagcagaacaagaagcgttcggac
gaactcttccgctcgcagatcatcacggcgcaggagaacgagcaggccggcctcacgtac
cagaacgcgctctcgcagatcgtgcgtgcgcgcaccaacctcgacctcgcgcagcagcgt
ctcgacgacgcgcgcgtcgtcgcgccggtgcgcggcacggtcatcgagaagcccgtcgcg
ctgggtcaggtgattcagtccggcacgcaggccgtcggtggcggcacgaccatcatcaag
atggccgacctcacgaaggtccgcgcccgcgcgctggtcaacgaaacggacatcggtcgc
gtgatgcagggccaggaagcgacggtgatcgtcgacgccttccctgatcgtcccttccgc
ggcaccgtcgagaagatcgagccgcaggccgtcgtgcagcagaacgtcacgatgtttccg
gtgctcgtctcgctcgagaaccgcgagggcctgctcctccccggcatgaacggcgaggtg
agcatcatctcagatcgccgcgagaacgtgattgcggtgccgaacgaagcgattcgctcg
gtgcgtgaagtggcgcaggtggccggactcctgggcctcaacgccgacagcgtgcaggcg
cagctgcgcagcgcgatgggcggcggcttcggcggcggtgcccccatgggcatgaacggc
ggcgcgcgtccgcagggcggcccgccggccggtggcgcgcaggcgcgaccgggctatgcg
gacttctcggcgcagcagggcgggcgtcagggcggccagggtggcttccagatgcccgac
gtcacggacgcgcagtgcaaggcggttgcggatgcccgcgcggccaagccggccgtcgcg
cggcgcctcgactcgctgcagacggcgatgcgcagcaatgatgcggatcgcccggccctc
atgggcggcattcgcgcggcgtacaccgagctcggcgtcgacgcgatggtcgcacgggcc
tgcctggcgcgccagcagggcggcggcgcacgcaccgcagggccggcggcccccacgggc
cagcccacgccggcgcgcaatggtccgcgcgcgctgcaggcaccgggcgcgcagaccggt
ggcgccgcccgcaatggcggcagccgcgccggttcgcgctctggcctcgtcttcgtccag
aaggccgactccacctgggagccgcgcatggtccgcctcggcgtcgccgattacgactac
accgaagtcctcagtggtctcgaggaaggcgagcaggttgcgctgctcagcgccgtcgcg
ctccaggcgcagcggcaggagaaccaggaccgcatgcgcgcgatgaccggtggcgcgtca
ccgctcggcggcgcgccggcaggccctggcggcgggcggccgaggtaa
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