Pseudogemmatithrix spongiicola: Strain318_000424
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Entry
Strain318_000424 CDS
T10301
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Strain318_000424 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspc03400
]
Strain318_000424 (ruvB)
Enzymes [BR:
pspc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Strain318_000424 (ruvB)
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Strain318_000424 (ruvB)
RecFOR pathway proteins
Strain318_000424 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_3
AAA_18
AAA_16
TIP49
AAA_14
AAA_17
nSTAND3
NTPase_1
TsaE
ABC_tran
Sigma54_activ_2
AAA_28
RNA_helicase
Rad17
AAA_33
NB-ARC
bpMoxR
AAA_25
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WKW14099
UniProt:
A0AA49Q6W5
LinkDB
All DBs
Position
complement(471825..472856)
Genome browser
AA seq
343 aa
AA seq
DB search
MSRPEITTPEALTDESVVELSLRPQRLAEFIGQGKVKDALRIYVDAATGRSEPLDHTLLF
GPPGLGKTTLAELIAREMGVNIHTTSGPALEKPGDLVGTLTNLRAGDILFIDEIHRLKPV
IDEFLYPAMEDSKIDIRLSEGPKAQTITMPIERFTLIGATTRLGMLTAPLRARFGIELRL
NYYPAAEIEEIVHRTAVVLGCSVDAEGAAELARRARGTPRVANRLLRRVRDFAQVKASGH
ISRDVAREALAMLDVDEFGLDEMDTRLLRAIIEKFDGGPVGVGTIAAAVGEDADTIEEVY
EPFLVQNGFLQRTPRGRVASAQAYRHLGYPPPSRPADAQPELF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccctgaaatcaccacgccggaagccctcaccgacgagtcggtggtggagctg
tcgctgcgcccgcagcggctggcggagttcatcggccaaggcaaggtgaaggacgcgctg
cgcatctacgtggatgccgcgaccgggcgcagtgagccgctggaccacacgctgctcttc
ggcccgccgggcttgggcaagacgacgttggcggagctgatcgcgcgggagatgggcgtg
aacatccacacgaccagcgggccggcgctggagaagccgggcgacctcgtgggtacgctc
accaacctgcgcgccggcgacatcctgttcatcgacgagatccatcgcctgaagccggta
atcgacgagttcctgtatccggcgatggaagactcgaaaatcgacatccggctgagcgaa
ggcccgaaggcgcagacgatcacgatgccgatcgagcgcttcacgctgatcggcgcgacg
acccggctcggcatgctgacggcgccgctgcgcgcgcgcttcggcatcgagctgcggctc
aactactacccggccgcggagatcgaggagatcgtgcatcgcacggccgtggtgctgggc
tgcagcgtggacgccgagggtgcggcggagctggcgcggcgcgcgcgcggcacgccgcgc
gtggccaaccggctgttgcgccgcgtgcgggacttcgcgcaggtgaaggccagcggccac
atctcgcgcgacgtggcgcgcgaggcgctggcgatgctcgacgtggacgagttcggcctc
gacgagatggacacgcggctgctgcgcgcgatcatcgagaagttcgacggcgggccggtg
ggcgtgggcacgatcgccgcggcggtcggcgaggacgccgacaccatcgaggaagtgtac
gagccgttcctcgtgcagaacggcttcctgcagcgcacgccgcgcgggcgcgtggcctcg
gcgcaggcctatcggcatttggggtatccgccgccctctcgccccgccgacgcgcagcct
gaactgttctga
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