Pseudogemmatithrix spongiicola: Strain318_000432
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Entry
Strain318_000432 CDS
T10301
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Strain318_000432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_000432
Enzymes [BR:
pspc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Strain318_000432
Transporters [BR:
pspc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Strain318_000432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
AAA_21
AAA_33
RsgA_GTPase
AAA_25
Zeta_toxin
nSTAND1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WKW14107
UniProt:
A0AA49JSJ8
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All DBs
Position
478705..480525
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AA seq
606 aa
AA seq
DB search
MRLYRRLLVFLRPHTWRLVGNILFNVTAAALDGIAFTLLIPFLNTLFGMPNAIAQDMGWL
TVAQDRLIGAFLVPDQPLASLRGVILVIIAMVALKNVFLWAGGQLGASLQEYLTRDLRAA
VFAHMQRLPLGWFSRTKTGQIIARILTDTEQTKAILAEVATRTIQNAAQLLVTIWILYTM
SPRLTLYALVVAPLIIGLLQPILRKLRKGHRRLRAEYGEITSVLQEVVSGIRLVKSFRGE
AYEDGRFIGASGRYSKGMTRIQRIALLSGPLTEVLGTVVAVAILWLGAQEVLGGRGMDGG
TLITFMVLVMRLLQPLKQLSQAPTIAQQSLAAAERLFDVLDQPTELQADRGTRDVRGLER
ELVFDAVGFAYGDEPVLRDVSFTARKGEVIALVGASGAGKSTLVDLIPRFIEPTSGRILL
DGVDTREIKLPALRSLTGIVSQDTVLFNDTVRANIAYGAGEKYTQAQVEAAARAANAHEF
IAALPEGYDTVLGERGTRLSGGQRQRLAIARALLTDPPILILDEATSALDTESERLVQEA
LDRLLAGRTTFVIAHRLSTIVHATQILVMDAGQVVERGTHDELLARGGAYARLHALQQRG
ERNGDG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctctaccgccggctcctggtcttcctccgcccgcatacgtggcggctggtcggg
aacatcctgttcaacgtgaccgccgccgcgctcgacggcatcgcgttcacgctgctcatt
ccgttcctgaacacgctgttcggcatgccgaacgcgattgcgcaggacatgggctggctc
acggtggcgcaggaccgcctcatcggcgcgttcctggtgcccgaccagcccctcgcgtcg
ctgcgcggcgtgatcctggtgatcatcgcgatggtcgcgctcaagaacgtcttcctctgg
gccggcggccaactcggcgcctcgctgcaggaatacctcacgcgcgacctgcgcgccgcg
gtcttcgcccacatgcagcgcctgccgctgggctggttctcgcgcaccaagacgggccag
atcatcgcccgcatcctcaccgatacggagcagacgaaggcgatcctcgccgaggtcgcc
acgcgcacgatccagaacgccgcgcagctcctcgtgacgatctggatcctctacacaatg
tcgccgcggctcacgctgtacgcgctcgtcgtcgcgccgctcatcatcgggctgttgcag
cccatcctgcgcaagctgcgcaaggggcaccgccgcctgcgcgccgagtacggcgagatc
accagcgtgctgcaggaggtggtgagcggaatccgcctcgtgaagtcgttccgcggagaa
gcgtacgaagacggtcgcttcatcggggcctcgggccgctactcgaaggggatgacgcgc
atccagcgcatcgcactgctcagcgggccgctcacggaagtgctcgggaccgtggtcgcg
gtggcgattctctggctcggcgcgcaggaggtgctcggcggccgcggcatggatggcggc
acgctgatcaccttcatggtgctcgtgatgcgcctgctgcagccgctcaagcagctctcg
caggcgccgaccatcgcgcagcagtcgctggccgcggccgagcggctgttcgacgtgctc
gaccagcccacggagctgcaggccgaccgcggcacgcgcgacgtgcgcggattggagcgc
gagctcgtgttcgacgcggtcggcttcgcctacggcgacgagcccgtgctgcgggacgtc
tcgttcaccgccaggaagggcgaggtcatcgcgctcgtcggtgccagtggcgcgggcaag
agcacgctcgtggatctcattccgcgcttcatcgagccgacgagcggtcgcatcctgctc
gacggcgtggacacgcgcgagatcaagctgcccgcgctgcgctccctgacggggatcgtc
tcgcaggacaccgtgctcttcaacgacaccgtgcgcgccaacatcgcctacggtgcgggt
gagaagtacacgcaggcgcaggtcgaggcggcggcgcgcgcggccaacgcgcacgaattc
atcgccgcgctgccggaaggctacgacaccgtgctcggcgagcgcggcacgcggctctcc
ggcggccagcgccagcgcctggcgatcgcccgcgcgctgctcaccgacccgccgatcttg
atcctcgacgaagctacgagcgcgctcgataccgagagcgagcgactcgtgcaggaggcg
ctggaccgcctgctcgccgggcgcacgacctttgtgatcgcgcatcgcctgagcaccatc
gtgcacgcgacgcagatcctcgtgatggacgccgggcaggtggtggagcgcggcacgcat
gacgagctgctggcgcgcggcggcgcgtatgcccgcctgcacgcgttgcagcagcgcggg
gagcgcaacggcgatggctga
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