Pseudogemmatithrix spongiicola: Strain318_000439
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Entry
Strain318_000439 CDS
T10301
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00550
Peptidoglycan biosynthesis
pspc01100
Metabolic pathways
pspc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Strain318_000439
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Strain318_000439
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspc01003
]
Strain318_000439
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pspc01011
]
Strain318_000439
Enzymes [BR:
pspc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Strain318_000439
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Strain318_000439
Glycosyltransferases [BR:
pspc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Strain318_000439
Peptidoglycan biosynthesis and degradation proteins [BR:
pspc01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Strain318_000439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
WKW14114
UniProt:
A0AA49Q3Z1
LinkDB
All DBs
Position
487573..489681
Genome browser
AA seq
702 aa
AA seq
DB search
MLNKYPRLKKFLLRATLVGAGLSVFGLLVFGVWWGFFLCSDETCPSIEQFAEYKPAEPAR
LYAADGRFIGEIGLERRSVVALDDIPRHVVDAFVITEDKRFYQHHGVDYIRVFGAVIANL
KAGGLSEGFSTITMQLARNIFPAQLPSRSKAGSAYNNIVRKFREAKVARRIEARFPKERV
LELYLNQIALGAGAYGVEAASQRYFGRPVSEITVAEGAMLAALPKAPSRYNPRRFPDRAI
QRRNTILELMRREGALSDADASIAKAYPLRLNRSARGAGDPAPYFVEWVRTELEQRFGRQ
VYESGLRVLTTLDLDMQGAAERAVERQLRAIEANTWGPYTQTTYEEYLARAAAGDAAGSG
NNSPYLQASFIALDPRTGAVRALVGGRDFDDSKFNRATQALRQPGSTFKPIVYATAIRSG
RTPAYFIDDEPIEVPQLDGTVWSPNNYDLKFEGRVTLRRALMFSRNLPAIRLTMEIGEGS
VVDMAKQFGLTTRVPPYPSIALGSADVYPLEMVAAYSTFANLGWRTAPNPILRVETLDGR
RLYQADPERIQVLSREESWVMVDMLKDVIRAGSGTRVRSEGFTHPAGGKTGTTNDYTDVW
FVGFTADLVAGVWIGFDQPKEIMGQAQGGRLAAPAWASFMREVYERKPAPPDWPRPPGVL
AIPIDPATGLRAGLGCISDTIRTEFFITGTEPLQECPRRLFP
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaacaagtacccccggctcaagaagttcctcctccgcgcgaccctcgtcggcgcc
ggcctcagcgtcttcggactcctcgtgttcggcgtctggtggggcttcttcctctgctcc
gacgagacctgcccgagcatcgagcagttcgccgagtacaagccggccgaaccagcgcgc
ctctacgccgccgacggccgcttcatcggtgagatcggcctggagcgccggtccgtcgtg
gccctcgatgacatcccgcgccacgtggtcgacgccttcgtcatcacggaggacaagcgc
ttctaccagcaccacggcgtggactacatccgcgtcttcggcgcggtgatcgccaacctc
aaggcgggcggtctctcggaaggcttctcgaccatcacgatgcagttggcgcgcaacatc
ttcccggcccagctgccgtcgcggtccaaggcagggagtgcgtacaacaacatcgtccgc
aagttccgcgaggcgaaggtggcgcggcgcatcgaagcgcgctttcccaaggagcgcgtc
ctcgagctgtatctgaaccagatcgccctcggcgcgggcgcctacggcgtcgaagccgcg
tcgcagcgctacttcgggcggccggtcagcgagatcacggttgccgaaggcgccatgctg
gccgcgttgccgaaggcgccctcacgctacaacccgcggcgtttccccgaccgcgccatc
cagcgccgcaacaccatcctcgagctcatgcgccgcgaaggcgcgctgtcggatgccgac
gcgagcatcgccaaggcctacccgttgcgcctcaaccgctcggcccgcggggcgggagat
cccgcgccgtacttcgtcgaatgggtgcgcacggagctcgagcagcgcttcgggcggcaa
gtctacgaaagcgggctgcgcgtgctcaccacgctggacctcgacatgcagggcgcggcg
gagcgtgccgttgaacgccagttgcgcgccatcgaggcgaacacgtggggcccgtacacg
cagacgacctacgaggagtacctcgcgcgcgccgccgccggcgatgccgccggcagcggc
aacaactcgccctacctccaggccagcttcatcgcgctcgatccacgcaccggcgcggtg
cgcgccctcgtcggcggccgcgacttcgacgattccaagttcaaccgtgccacgcaggcc
ctgcgccagcccggctcgaccttcaagccgatcgtctacgccacggccatccgctcgggc
cgcacgccggcgtacttcatcgacgacgaaccgatcgaagtgccgcagctcgacggtacc
gtgtggtcgccgaacaactacgacctcaagttcgagggccgcgtcacgctgcgtcgcgcc
ctcatgttctcgcgcaacctgccggccatccgcctcacgatggagatcggagaaggcagc
gtcgtcgacatggccaagcagttcggcctcacgacgcgcgtgccgccgtacccgtccatc
gcgctcggctcggccgacgtgtatccgctggaaatggtcgccgcgtactcgaccttcgcc
aacctcggctggcgcaccgcgccgaacccgatcctgcgcgtcgagacgctcgatggccgt
cggctctatcaggccgacccggagcgcatccaggtgctctcgcgcgaggaatcgtgggtg
atggtcgacatgttgaaggacgtgatccgtgccggttccggcacgcgcgtccgcagcgaa
ggcttcacgcatcccgccggcggcaagacgggcacgaccaacgactacaccgatgtctgg
ttcgtcggcttcactgccgatctcgtcgctggcgtgtggatcggtttcgaccagccgaag
gagatcatgggccaggcgcagggcgggcgactcgcggcgcccgcgtgggccagcttcatg
cgcgaggtctacgagcgcaagccggcgccgcccgactggccgcggccgccgggcgtgctc
gcgattcccatcgatcccgccaccggcctgcgcgctggactcggctgcatctccgacacc
atccgcaccgagttcttcatcaccggcaccgagccgctgcaggagtgcccgcggagactc
tttccctga
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