KEGG   Pseudogemmatithrix spongiicola: Strain318_000446
Entry
Strain318_000446  CDS       T10301                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
pspc  Pseudogemmatithrix spongiicola
Pathway
pspc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pspc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Strain318_000446
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pspc02022]
    Strain318_000446
Two-component system [BR:pspc02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   Strain318_000446
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA AAA_5 Mg_chelatase AAA_16 AAA_3 TIP49 MCM HTH_50 AAA_22 Torsin AAA_2 ATPase IstB_IS21 AAA_7
Other DBs
NCBI-ProteinID: WKW14121
UniProt: A0AA49JY57
LinkDB
Position
complement(496080..497456)
AA seq 458 aa
MASVLIVDDEPNIRRMVGALLGAEGYEVHEAADARSGLDKASETDPDLVLLDLMMPNPTD
GLVLLEQLRERIPDLPVVMMSGRAGLGDAVKATRLGAVNFLEKPLTPEGVLLAISGALEL
RQARRERSALRADLGLAGQLVGTSPAMDAVKAMIARVAPSDARVLITGESGTGKELVAAA
IHAQSPRREKPFVRVNCAAIPRDLVESEMFGHERGAFTGATERRIGRFEMAHTGTLLLDE
VGELSAEAQAKLLRAIEAREIERVGGGRHIKVDVRVLAATNRDLAKEVREGRFREDLYFR
LNVIPMSVPPLREHPGDIPDLVLHFATLHRRRSGQPAPTWSGAAVDAMTRYRWPGNVREL
ANIVERLAILHAGQEITADHVLEVLPTLDIATSAPAALPAADRLEMGLSDQLDEYERLLI
QRALQAANGVVAEAARRLQTDRPNLYRRMRRLGISGVE
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggcatccgtactcatcgtcgacgacgaacccaacatccgccgcatggtcggcgcgctg
ttgggcgccgagggctacgaggtccacgaggccgccgatgcgcgcagcggcctcgacaag
gcgtcggagaccgatcccgatctcgtgctgctcgacctcatgatgccgaacccgacggac
gggctggtattgctcgagcaactgcgggagcgcatcccggacctgccggtcgtcatgatg
tccgggcgcgcgggcctcggggacgcggtcaaggcgacgcggctcggcgcggtgaacttc
ctcgagaagccgctcacgcccgagggggtgctgctggcgatctccggtgcgcttgaactg
cgtcaggcccgccgcgaacgcagcgcactgcgcgccgacctcgggctcgcgggtcagctc
gtcggcacgagcccggcgatggacgccgtgaaggcgatgatcgcgcgcgtggccccgagc
gacgcgcgcgtgctgatcacgggcgagagcggcacgggcaaggagctggtggccgccgcg
atccacgcgcagagcccgcggcgcgagaagccgttcgtgcgcgtgaactgcgcggcgatc
ccccgcgacctcgtggagagcgagatgttcggccacgagcgcggtgccttcaccggcgcg
acggagcgtcgcatcggccgcttcgagatggcccacacgggcacgctgctgctcgacgaa
gtcggcgaactctcggccgaggcgcaggccaagctgctgcgcgcgatcgaagcgcgggaa
atcgagcgcgtgggcggcgggcggcacatcaaggtggacgtgcgcgtgctcgcggcgacg
aaccgcgacttggcgaaggaagtgcgcgaggggcgattccgcgaggatctctacttccgg
ttgaacgtcatcccgatgtccgtgccgccgctgcgcgagcatccgggcgacatccccgac
ctcgtcctgcatttcgcgacgctgcaccgacgccgcagcggccagcccgcgccgacgtgg
agtggcgccgccgtggacgcgatgacgcggtaccgctggccgggcaacgtgcgcgagttg
gcgaacatcgtggagcgcctggcaatcctgcacgcgggccaggagatcacggccgatcac
gtgctcgaggtgctgccgacgctggacatcgcgacgtcggcaccggcggccctgcctgcc
gccgaccgactggagatggggttgagcgaccagctcgacgagtacgagcgcctcctcatc
cagcgcgcgctgcaggcggcgaacggcgtcgtggccgaggcggcgcggcggctgcagacg
gaccgtccgaacctgtatcgccggatgcgccgactcggcatttccggggtagagtga

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