Pseudogemmatithrix spongiicola: Strain318_000577
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Entry
Strain318_000577 CDS
T10301
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00061
Fatty acid biosynthesis
pspc00071
Fatty acid degradation
pspc01100
Metabolic pathways
pspc01212
Fatty acid metabolism
pspc02024
Quorum sensing
pspc04146
Peroxisome
Module
pspc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Strain318_000577
00071 Fatty acid degradation
Strain318_000577
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Strain318_000577
09145 Cellular community - prokaryotes
02024 Quorum sensing
Strain318_000577
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspc01004
]
Strain318_000577
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspc04147
]
Strain318_000577
Enzymes [BR:
pspc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Strain318_000577
Lipid biosynthesis proteins [BR:
pspc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Strain318_000577
Exosome [BR:
pspc04147
]
Exosomal proteins
Exosomal proteins of breast milk
Strain318_000577
Exosomal proteins of breast cancer cells
Strain318_000577
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
WKW14245
UniProt:
A0AA49JSR0
LinkDB
All DBs
Position
complement(640978..642795)
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AA seq
605 aa
AA seq
DB search
MIATGGPRPAPGTLTQIFFQSVESHDLPAAYQFKKDGRYQPISHKDVLRRVRHITLGLES
LGVKRGDRVGIMSENRPEWALADWACLCSGMTDVPVYPTLPAEQIVHPLNDSGAVALFVS
TPEQAAKAKSVRGEFKTLRHIISFVDSKPDGVDFTLAEIEAKGATMDSPEKAAAFKAGAL
SVQPDDLATLIYTSGTTGLPKGVMLTHDNIYSNVKASEKKVPVRAGEVALSFLPLSHIFE
RMGDYLFFCCGVSIAYAESIDTVPLNLSEVKPHFCMSVPRLFEKMYARVLENAVSGGAVK
AKIFRWAVGVADAWANEKLAGREPGGFLAWKYGIAQKLVFSKLKERTGGRLRYFVSGGAP
LNPTINKFFYAAGLKILEGYGLTETSPVIAVNADDAFRIGSVGKPVAGVEVKIAADGEIL
TRGPHVMKGYYNRPDATAEAIDSEGWFHTGDVGVLEDGFLRITDRKKDIIVTAGGKNIAP
QPIENRIKTNKYVSQAVMIGDKRKFPIVLIVPNWDNLEKWAALKNIIWTDRKQLLEMPTI
QAKMDKEVRKTIEGLASFESPKKIGLLEHDFSIERGELTPKLSVKRKVIDTQYRALIDSL
YEGAD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccactggaggcccgcgccccgcgccgggcacactgacacagatcttcttccaa
tctgtcgagtcccacgacctgcccgcggcctaccagttcaagaaggacggtcgctaccag
ccgatctcgcacaaggacgtgctgcggcgcgtgcgccacatcacgctcggcctcgaatcc
ctcggcgtgaagcgcggggaccgcgtcggcatcatgtcggagaaccgccccgagtgggcg
ctcgccgactgggcctgcctctgcagcggcatgacggacgtgcccgtgtatccgacgctg
cccgccgagcagatcgtgcacccgctgaacgactccggcgccgtggcgctgttcgtcagc
acgccggagcaagcggcgaaggccaagtccgtgcgcggcgagttcaagaccctgcgccac
atcatctcgttcgtcgacagcaagcccgacggcgtcgatttcacgctggccgagatcgag
gcgaagggcgcgacgatggactcgccggagaaggccgcggcgttcaaggccggcgccctg
tcggtgcagccggacgacctcgccaccctgatctacacctcgggcaccaccggcctcccc
aagggcgtgatgctgacgcacgacaacatctactcgaacgtgaaggcgtccgagaagaag
gtgccggtgcgcgcgggcgaggtcgcgctgagcttcctgccgctctcgcacatcttcgag
cgcatgggcgattacctgttcttctgctgcggcgtgagcatcgcgtacgcggagagcatc
gacaccgtgccgctcaacctctccgaggtgaagccgcacttctgcatgtcggtgccgcgc
ctcttcgagaagatgtacgcccgcgtgctcgagaacgccgtgagtggcggcgcggtgaag
gcgaagatcttccgctgggccgtcggcgtggccgatgcctgggccaacgagaagctggcc
ggccgcgagcccggcggcttcctcgcgtggaagtacggcatcgcgcagaagctcgtgttc
agcaagctcaaggagcgcaccggcggccggctccgctacttcgtgtcgggcggcgccccg
ctcaacccgacgatcaacaagttcttctacgcggccggcctcaagatcctcgagggatac
ggcctcaccgaaacctcgcccgtgatcgccgtcaacgccgacgacgccttccgcatcggc
tcggtgggcaagccggtggccggcgtcgaggtgaagatcgccgccgacggcgagatcctg
acgcgcggcccgcatgtcatgaagggctactacaaccggcccgacgccacggccgaggcc
atcgacagcgagggctggttccacaccggagacgtcggcgtgctcgaggatggcttcctc
cgcatcaccgaccgcaagaaggacatcatcgtcaccgcgggcggcaagaacatcgcgccg
cagccgatcgagaaccgcatcaagaccaacaagtacgtctcgcaggcggtgatgatcggc
gacaagcgcaagttcccgatcgtgctcatcgtccccaactgggacaacctcgagaagtgg
gcggcgctcaagaacatcatctggaccgaccgcaagcagctgctcgagatgccgacgatc
caggcgaagatggacaaggaagtgcgcaagaccatcgagggcctcgccagcttcgagtcg
ccgaagaagatcggcctgctcgagcacgatttctcgattgagcggggcgagctcacgccc
aagctcagcgtcaagcgcaaggtgatcgacacgcagtacagggcgttgatcgacagcctg
tacgagggggcggattga
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