Pseudogemmatithrix spongiicola: Strain318_000597
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Entry
Strain318_000597 CDS
T10301
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspc03032
]
Strain318_000597 (gyrB)
03400 DNA repair and recombination proteins [BR:
pspc03400
]
Strain318_000597 (gyrB)
Enzymes [BR:
pspc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Strain318_000597 (gyrB)
DNA replication proteins [BR:
pspc03032
]
Prokaryotic type
DNA Topoisomerases
Strain318_000597 (gyrB)
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Strain318_000597 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WKW14264
UniProt:
A0AA49Q443
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All DBs
Position
complement(664706..666646)
Genome browser
AA seq
646 aa
AA seq
DB search
MAKTNDVADSQYDSSGIQVLKGLEAVRKRPGMYIGSTSHRGLHHLVYEVVDNSIDEALAG
YCDTVNVIIHPDDSISVEDNGRGIPVDIHPVEKLPGVELALTVLHAGGKFDKNTYKVSGG
LHGVGVSVVNALSEVLKVWVKRDGKEHYMDFARGGTTTKLKVLGQVKPKDTGTKVWFKPD
AQIFTELEYDYATLASRLRELSFLNKGVTITLKDEREGKQREETFHAKGGLREFVGFLNA
KQKALHSEIVYFDGEKDDIGIEIALQYNDGYNENVFSFVNNINTHEGGTHLTGFKSALTS
VINKHLDKSSFAKKDKDLKLSGDDVREGLTAVLSVKVREPQFEGQTKTKLGNSEAESAVK
TTVNEWLSTYLEEHPRVANAVLEKALSAARAREAARKARDLTRKKSALDVGNLPGKLADC
SLSDPAMCELYLVEGDSAGGSAKQGRDRMFQAILPLRGKILNVEKARIDKILGNEEIRTI
VTAIGAGIKEEFSLENVRYHKVIIMTDADVDGAHIRTLLLTFFFRQMPELIDAGMVYIAQ
PPLFSVSKGKEIYYAYDTQERDAIAQRMGGEDGKGLNIQRYKGLGEMNPDQLWKTTMDPE
TRTILKVTQDDAFQANEIFQTLMGDEVEPRRVFIETNAKFASNLDI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgaacgacgtcgccgattcgcagtacgactcctctggcatccaggtcctc
aaggggctcgaagccgtccgcaagcgccccggcatgtacatcggctcgacgtcgcatcgc
gggctgcaccatctcgtctacgaggtggtcgacaactcgatcgacgaggcgctcgccggc
tactgcgacacggtgaacgtcatcatccacccggatgattcgatttccgtcgaggacaac
ggccgtggcatcccggtggacatccacccggtggagaagctgccgggcgtcgaactcgcg
ctcaccgtgctgcacgcgggcggcaagttcgacaagaacacctacaaggtctcgggcggc
ctgcacggcgtcggcgtgtccgtcgtgaacgcgctctccgaagtgctgaaggtctgggtg
aagcgcgacggcaaggagcactacatggacttcgcgcgcggcggcacgacgacgaagctc
aaggtgctcggccaggtgaagcccaaggatacgggtaccaaggtctggttcaagcccgac
gcgcagatcttcacggaactcgagtacgactacgcgacgctggcgtcgcgcctgcgtgag
ctgtccttcctcaacaagggcgtgaccatcacgctcaaggacgagcgcgagggcaagcag
cgcgaggagaccttccatgcgaagggcggcctccgggaattcgtcggcttcctcaacgcc
aagcagaaggcgctgcactccgagatcgtctacttcgacggcgagaaggacgacatcggc
atcgagatcgcgctgcagtacaacgacggctacaacgagaacgtgttctcgttcgtgaac
aacatcaacacgcacgagggcggcacgcacctcaccggcttcaagtcggcgctcacgagc
gtgatcaacaagcacctcgacaagtcgtcgttcgccaagaaggacaaggacctcaagctc
tccggcgacgacgtccgtgaaggcctcacggccgtgctctcggtgaaggtccgtgagccg
cagttcgagggccagaccaagaccaagctgggcaactcggaagccgagtcggcggtgaag
acgacggtgaacgagtggctctcgacctacctcgaggagcatccgcgcgtcgccaatgcc
gtgctggagaaggcgctgagcgccgcccgcgcgcgcgaggccgcccgcaaggcccgcgac
ctgacccgcaagaagtcggcgctcgacgtcggcaacctgccgggcaagctcgccgactgc
tcgctctccgaccccgcgatgtgcgagctctacctggtggaaggtgactccgccggtggc
tcggccaagcagggccgcgaccgcatgttccaggccatcctgccgctgcgcggcaagatc
ctcaacgtcgagaaggcgcgtatcgacaagatcctcggcaacgaggagatccgcacgatc
gtcacggccatcggcgccggcatcaaggaagagttctcgctcgagaacgtgcgctaccac
aaggtcatcatcatgaccgacgccgacgtggacggcgcgcacatccgcaccctgctgctg
acgttcttcttccgccagatgccagagctcatcgacgccggcatggtgtacatcgcgcag
ccgccactgttctcggtgtcgaagggcaaggagatctactacgcctacgacacgcaggag
cgcgatgccatcgcccagcgcatgggcggcgaggacggcaagggtctcaacatccagcgc
tacaagggtctcggcgagatgaatcccgaccagctctggaagaccacgatggatccggaa
acgcgcacgatcctcaaggtcacgcaggacgatgcgttccaggcgaacgagatcttccag
accctcatgggtgacgaagtcgagccgcggcgcgtgttcatcgagaccaacgccaagttc
gcgtcgaacctcgatatctag
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