Pseudogemmatithrix spongiicola: Strain318_000611
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Entry
Strain318_000611 CDS
T10301
Name
(GenBank) heme lyase CcmF/NrfE family subunit
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_000611
Transporters [BR:
pspc02000
]
Other transporters
Others
Strain318_000611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
CcmH
ResB
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
WKW14277
UniProt:
A0AA49Q411
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All DBs
Position
678815..680836
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AA seq
673 aa
AA seq
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MVLVGELSLWIALLMGVWAVTLSFAGGYLKREDLIVSGERGLYATTGFVVLASLGLWTAL
LTSDFSVRYVASFTSANLPIVYKFSAFWGGQAGSMLFWCLVLAGYAAAATFTNRSKNRAL
MPWVTGTNAAVLLFFVMATTIASNPFERLEWIPPDGRGLNPQLQNPAMAIHPPLLYLGYV
ATAIPFGFAIAALVTRRLDAEWLGAVRKWSIISWVFLTLGILLGMWWAYVELGWGGYWMW
DPVENASLLPWLTGTAFLHSIMIQEKRGMLRKWNVILVVGTFLLSILGTFITRSGIIQSV
HSFAQSNIGMWFAVFMVLMLVVTSWLVSVRLKDLEAKAELEAMISREAAFLYNNLVLVGI
AFSVLWGTLFPILSEAVRGSKITVGESFFNTVNVPLGLLLLALTGIGPLIAWRRASVQNI
QRQFAGPAFFGVVAAAVLWVLGARELYPLMAWGLGAFVAGTIIQEFYKGAMARMKMHGEN
IFTALVNLVTRNRRRYGGYIVHAGIVILFSAFAGMAFRQEYDVTLREGESFTTKDPFGKE
WTFTSDGISQFKALNRDVVTVALMPVMEGKAFPVLTSEKRQHFDTRGNPTFQPSTEVGIL
QMQRQDVYLVLAGTIGDRAEIRINFNPLVVWVWHGGILMALGGLIVMWPQSERKRQGGYV
TELAPQHAETAGV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtggttctcgtcggcgagctgtccctgtggatcgccctcctgatgggcgtctgggccgtc
acgttgagtttcgcgggcggctacctcaagcgtgaagacctgatcgtcagcggcgagcgc
ggcctctatgccaccacgggcttcgtggtgctggcctcgctcggactctggaccgcgctg
ctgaccagtgatttttccgtgcgctacgtggcatcgttcacgagcgccaacctgccgatc
gtctacaagttctcggcgttctggggcggccaggcgggctcgatgctcttctggtgcctt
gtgcttgccggctatgcggccgcggcgacgttcaccaaccgaagcaagaaccgcgcgctg
atgccgtgggtgacgggcacgaacgccgcggtgctgctcttcttcgtgatggcgacgacg
attgcgtcgaacccgttcgaacgactcgagtggattccgcccgatggccgcggcctgaac
ccgcagctgcagaacccggcgatggccatccatccgccgctgctctacctgggctacgtc
gcgacggcgattcccttcggcttcgcgatcgccgcgctggtcacgcgccgcttggacgcc
gagtggttgggcgcggtgcggaagtggagcatcatctcctgggtgttcctcacgctgggc
atcctgctcgggatgtggtgggcgtacgtggagctgggttggggcggctactggatgtgg
gacccggtggagaacgcctcgctgctcccctggctgacgggtacggcgttcctgcactcg
atcatgatccaggaaaagcgcggcatgctgcgcaagtggaacgtgatcctggtcgtcggc
acgttcctgctcagcatcctcggcacgttcatcacgcgctcggggatcatccagagcgtg
cactcgttcgcgcagagcaacatcggcatgtggttcgccgtgttcatggtgctcatgctc
gtggtgacctcgtggctggtctcggtccgcctcaaggacctggaggcaaaggccgagttg
gaggcgatgatctcgcgcgaggcggcgttcctgtacaacaacctcgtgctggtgggcatc
gcgttctcggtgctctgggggacgctgttcccgattctctccgaggcggtgcgcggctcg
aagatcacggtgggcgagagcttcttcaacacggtgaacgtcccgctgggcctgctgctg
ctggcgttgaccggcatcggcccgctgatcgcctggcgtcgcgcctcggtgcagaacatc
caacggcagttcgcgggcccggcgttcttcggcgtcgtggccgctgccgtgctctgggtg
ctcggcgcgcgcgaactctacccgctgatggcctggggcctcggcgccttcgtggccggc
acgatcatccaggagttctacaagggtgcgatggcgcgcatgaagatgcatggcgagaac
atcttcaccgcgctcgtgaacctcgtgacgcgcaatcgccgccgctacggcggctacatc
gtgcacgcgggcatcgtcatcctgttctcggcgttcgccggcatggcgttccgtcaggag
tacgacgtgacgctgcgcgaaggcgagagcttcacgaccaaggatccgttcggcaaggaa
tggaccttcaccagcgacggcatctcgcagttcaaggcgctgaaccgcgacgtcgtcacg
gtcgcgctgatgccggtcatggaaggcaaggccttcccggtgctcaccagcgagaagcgg
cagcacttcgatacgcgcggcaacccgacgttccagccgagcacggaagtgggcatcctg
cagatgcagcggcaggacgtgtacctcgtgcttgccggcacaatcggcgaccgcgcggag
atccgcatcaacttcaatccgctcgtcgtgtgggtgtggcacggcggcatcctgatggca
ctgggcggcttgattgtgatgtggccgcagagcgagcggaagcggcagggcggctacgtg
acggaactcgcgccgcagcacgccgagacggcgggcgtctga
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