Pseudogemmatithrix spongiicola: Strain318_000770
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Entry
Strain318_000770 CDS
T10301
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Strain318_000770 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspc03400
]
Strain318_000770 (priA)
Enzymes [BR:
pspc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Strain318_000770 (priA)
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Strain318_000770 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
Zn_ribbon_6
PBP_like
AAA_16
DZR_2
AAA_22
AAA_25
AAA_11
zf_Rg
SLFN-g3_helicase
IBR_1
Motif
Other DBs
NCBI-ProteinID:
WKW14425
UniProt:
A0AA49JY98
LinkDB
All DBs
Position
861091..863352
Genome browser
AA seq
753 aa
AA seq
DB search
MTVAARLVEVALPLPLLRTFTYAVPERTRHPLLPGSRVVAPVRGKRVIGICVGESDGAQL
GGKEAKALLDVPDATPALPPDLLAVCRWISEYYVAPLGLVCRAVLPAALGSATKPDAPGK
QERILVLSGELPTLLGRDEAFKRAPQQRQLYELLEQLGGRAAVTHLVEQLGCTPSVVTGL
VKRGLVRIEQASRLRDPFADRSVARAALPTPTPAQREAIDRIVASPPGAVTLLHGITGSG
KTLVYLEVLKEMVLQQGKSAIVLVPEIALTPQAVDRFRAVFGDQVAVLHSGLSDGERLDA
WRALQRGERRIAVGARSAVFAPLENLGAIIVDEEHEASYKQAETPRYHAREVAIMRARET
GARCVLGSATPALETWVNARDGRYGQISLPERVGGGALPPVRVVDLRQELRAAPAPQRAL
RSVLSVPLERALHDRLARGEQSILLLNRRGYASFVQCDEGHVATCPNCSISLTYHRTPER
LVCHYCMHQASAESNCADCGLPFKRQRGLGTQQVERLLGDVLPTARIARMDVDTTSGKWA
HTAILDRVASHEVDILLGTQMIAKGLDFPNVTLVGVIDADIGINLPDFRSSERTFQLLSQ
VAGRAGRGPKGGEVFIQTRAPSHHAVRCAMTHDYLGFVNEELPARDSPPYPPTLRLANVV
VSGLDEAAVAAFATEVADWLTQAELRFGLGVTLLGPAPCPLERIKNRWRWHVLLKSERQA
PLTRLLRGLLTGIEVPARHDLRLVADRDPVSLL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagccgcgcgcctcgttgaggtcgcgctcccgctgccgctgctgcgcaccttc
acgtacgcggtgccggagcggacacggcatccgctcctcccgggcagccgcgtcgtcgcg
cccgtgcgcggcaagcgcgtcatcggcatctgcgtcggcgagagcgatggtgcgcagctg
ggcggcaaggaggccaaggcgctgctcgacgtccccgatgcgacacccgcgctgccgccg
gacctgctcgccgtctgtcggtggatcagcgagtactacgtcgctccgctcgggctcgtc
tgccgtgccgtgctcccggccgcgctcggcagcgcgaccaagcccgacgcacccggcaag
caggagcggattctcgtgctcagcggcgaactgccaaccctgctcggccgcgacgaagcc
ttcaagcgcgcgccgcagcagcgccagctctacgagttgctcgaacagctgggcggtcgt
gcagcggtcacgcatctcgtcgaacagttggggtgcacgccaagcgtcgtcacgggactc
gtgaagcgcggcctcgtgcgcattgagcaggccagccgcctgcgcgacccctttgccgac
cgcagcgtcgcgcgcgcagccctgccgacgccgacgcccgcgcagcgcgaggccatcgac
cgcatcgtcgcgagcccgcccggcgccgtgacgctgctgcatggcatcacgggcagcggc
aagacgctcgtgtatctggaagtcctgaaggagatggtgctgcagcaggggaagtcggcc
atcgtgctcgtgccggagatcgcgctgacgccacaggctgtggatcgcttccgggccgtg
ttcggcgaccaggtcgccgtcctgcactccggcctgagcgacggcgagcgcctcgatgcc
tggcgcgccttgcagcgcggggagcgtcgcatcgccgtcggcgcgcgttccgcggtgttc
gcgccgctcgagaacctcggggcgatcatcgtcgacgaagagcacgaggcgagctacaag
caagccgagacgccacgctaccacgcgcgcgaggtcgccatcatgcgcgcccgcgagacc
ggcgcgcgctgcgtgctcggctcggcgaccccggcgctggagacgtgggtgaatgcgcgc
gacggacgctacggccagatttcgctgcccgaacgcgtgggtggcggcgcgctgcccccc
gtacgcgtcgtggacctgcgccaggaactccgcgcggcgcccgcaccccagcgggccctt
cgcagcgtgctgagtgtgccgctcgagcgcgccctgcacgatcgcctcgcccgcggcgag
cagagcatcctgctgctcaaccgccgcggctacgccagcttcgtgcagtgcgacgagggc
catgtcgcgacctgtcctaactgctcgatttcgctgacgtatcaccgcacgcccgagcgc
ctggtgtgccactactgcatgcaccaggcctccgccgagtcaaactgtgcggactgcggg
ttgccgttcaagcggcagcgaggcctcgggacgcagcaggtggagcgcctgctcggcgat
gtgctccccaccgcgcgcatcgcgcggatggacgtcgacaccaccagcggcaagtgggcg
cacacggcgatcctcgatcgcgtcgcgagtcacgaggtcgatatcctgctcggcacgcag
atgatcgccaagggtctcgacttcccgaacgtgacactcgtgggcgtgatcgatgcggac
atcggcatcaacctgccggactttcgcagttctgagcgcacgttccagctgctcagccag
gtcgcaggccgtgccgggcgcgggccgaagggcggggaagtcttcatccagacgcgcgcg
ccgagccatcatgccgtgcgctgcgcgatgacgcacgactacctcggcttcgtcaacgag
gagctgccggcgcgcgattcgccgccgtatccgccgacgctccggctggcgaatgtcgtg
gtcagcggactcgacgaagcggcggtcgctgcgttcgccacggaggtggcggactggctc
acgcaggcggagctccgcttcggcctcggcgtcacgctgctcggacccgcgccctgccca
ctcgagcgcatcaagaaccgctggcgctggcatgtgctgctcaagagcgagcggcaggcg
ccgctgacgcggctgctgcgcggcctgctgacggggattgaggtgccagcgcggcacgac
ctgcgcctcgtggcggatcgcgacccggtcagcctgctctga
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