KEGG   Pseudogemmatithrix spongiicola: Strain318_000787
Entry
Strain318_000787  CDS       T10301                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pspc  Pseudogemmatithrix spongiicola
Pathway
pspc00230  Purine metabolism
pspc00240  Pyrimidine metabolism
pspc01100  Metabolic pathways
pspc01232  Nucleotide metabolism
Module
pspc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pspc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pspc00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Strain318_000787
   00240 Pyrimidine metabolism
    Strain318_000787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspc03400]
    Strain318_000787
Enzymes [BR:pspc01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Strain318_000787
DNA repair and recombination proteins [BR:pspc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Strain318_000787
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN RNA_pol_Rpb5_N
Other DBs
NCBI-ProteinID: WKW14442
UniProt: A0AA49Q6W8
LinkDB
Position
882319..884811
AA seq 830 aa
MPLPVNPPATPATLSQNARTVLEKRYLVKDKSGKPVETPEDMFWRVATTIAEADRKYGAT
DKQIEKTANQFYELMTQRRFEPNSPTLMNAGRPLGQLSACFVLPVDDALSNGQSGIYDTL
RSMALIHQSGGGTGFSFSRLRARGSMVRSTTGVASGPISFMQLYDASTDAVKQGGTRRGA
NMGILRVDHPDVMEFITSKEDLTKITNFNISVAITTKYMEALKAGTSYDLIDPATKKVVG
QMDAKEVWDKMIEGAWRTGEPGVFFIDEANRYNPVPHLGAYEATNPCGEQPLLPYDVCNL
GSINVGYYVNDGKMDWKSFAKDIHLSTKFLDNVIDANKYPLPEIDALSKRIRRIGLGVMG
FADALIKLGIVYDSPEGVEFGRKVMEFVDVEGKKESARLAEERGAFPEWAQSIWGPDATC
ARDENGNRIRPELKLRNCNVTTVAPTGTISIIAGCSSGLEPLFAVAFMRNQAGVMMPDVN
EDFVAIAKKEGWYSDALMERIAKTGSVIQPEVPEKWQKVFATANNIAPEWHIRMQAAFQE
HCDSAISKTTNFSHAATQDDVRKIYELAYEMKCKGVTVYRDGSRDGQVLSTGATAEAAAK
RDGKADEASRQELADLNERLAEVTAANQRLQKLLFDAEAENLQRRQKRARPDVLKSTAIR
KETPLGTMFVHITEDDKGQPFEVFINLGKAGGSAMADAEAMGRLISLSLRSGIPIQQVHR
QLRGISSDRAVGLGPNKVLSVPDAIGLALEDWMRTKQGVQQELLTTAETLAAPGAKPVVQ
QTVTAGGTQMAFESVNTGENFIGTCPDCGSQLEFAEGCVKCHVCGFSECG
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgccgctccccgtaaacccgcccgccacgccggcgacgctctcgcagaacgcgcgtacc
gttctcgagaagcgctacctcgtcaaggacaagtctggcaagccggtcgagacgccagaa
gacatgttctggcgcgtcgcgacgacgatcgccgaggcggatcgcaagtacggggcgacg
gacaagcagatcgagaagacggcgaaccagttctatgaactgatgacgcagcgtcgcttc
gagccgaactcgccgacgctcatgaacgccggccgtccgctgggccagctctccgcctgc
ttcgtgctgccggtggatgacgcgctctccaacggccagtcgggcatctacgacacgttg
cgctcgatggcgctcatccatcagtcgggtggcggcacgggcttctcgttctcgcggctg
cgcgcgcgcgggtcgatggtgcgatccaccaccggcgtcgccagcggcccgatctcgttc
atgcagctttacgacgcgtccacggacgcggtgaagcagggtggcacgcgccgcggcgcc
aacatgggcatcctgcgcgtcgatcacccggacgtcatggagttcatcacgtccaaggaa
gacctcacgaagatcacgaacttcaacatctccgtcgccatcacgacgaagtacatggag
gcgttgaaggccggcacgtcgtacgacctcatcgacccggcgacgaagaaggtcgtcggc
cagatggacgcgaaggaagtctgggacaagatgatcgagggcgcctggcgcacgggcgag
cccggcgtgttcttcatcgacgaggccaaccgctacaatccggtgccgcacctcggcgcc
tacgaggcgaccaacccctgcggcgagcagcccctgctcccgtacgacgtctgcaacctc
ggctcgatcaacgtcggctactacgtgaacgacgggaagatggattggaagtctttcgcc
aaggacatccacctctccacgaagttcctcgataacgtcatcgacgccaacaaatacccg
ctgcccgagatcgacgcgctgtccaagcgcatccgtcgcattggcctcggcgtgatgggc
ttcgccgacgcgctcatcaagctcggcatcgtctacgactcgccggaaggcgtggagttc
ggccgcaaggtgatggagttcgtcgacgtcgagggcaagaaggagtcggcccgcctcgcc
gaagagcgcggcgcgttcccggaatgggcgcagtccatctggggccccgacgccacctgc
gcgcgtgacgagaacggcaaccgcatccgtcccgagctcaagctgcgcaactgcaacgtc
accaccgtcgcgccgacgggcacgatctccatcatcgccggctgctcgtcgggtctcgag
ccgctcttcgccgttgccttcatgcgcaaccaggccggcgtcatgatgccggacgtgaac
gaagacttcgtcgccatcgccaagaaggaaggctggtactccgacgcgctcatggagcgc
atcgccaagacgggctcggtcatccagccggaagtgccggagaagtggcagaaggtgttc
gccacggcgaacaacatcgcgcccgagtggcacatccgcatgcaggccgcgttccaggag
cactgcgactcggccatctcgaagaccacgaacttctcgcacgccgccacgcaggacgac
gtgcgcaagatctacgagctggcgtacgagatgaagtgcaagggcgtcaccgtgtatcgc
gacggctcgcgcgacggccaggtgctctcgaccggcgccaccgccgaagccgccgccaag
cgtgatggcaaggccgacgaagcctcgcgccaggagctcgcggacctgaacgagcgcctc
gccgaagtcacggccgccaaccagcgcctgcagaagctgctgttcgacgccgaggccgag
aacctccagcgccgccagaagcgcgcgcgccccgacgtcctcaagtccacggccatccgc
aaggagacgccgctcggcacgatgttcgtgcacatcaccgaggacgacaagggtcagccc
ttcgaagtgttcatcaacctcggcaaggccggtggttccgccatggccgacgccgaagcg
atgggccgcctgatctcgctctcgctgcgctcgggcatcccgatccagcaggtgcaccgt
cagctgcgcggcatctcctcggaccgcgccgtgggcctcggccccaacaaggtgctctcc
gtgccggacgcgatcggcctcgcgctggaagactggatgcgcaccaagcagggcgtgcag
caggagctgctcacgacggccgagacgctggccgcgccgggcgccaagccggtggtgcag
cagaccgtgaccgccgggggcacgcagatggccttcgagtccgtgaacacgggcgagaac
ttcatcggcacctgcccggattgcggctcgcagctggagttcgcggaaggctgcgtgaag
tgccacgtgtgcgggtttagcgagtgcgggtga

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