Pseudogemmatithrix spongiicola: Strain318_000852
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Entry
Strain318_000852 CDS
T10301
Name
(GenBank) BamA/TamA family outer membrane protein
KO
K07278
translocation and assembly module TamA
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_000852
Transporters [BR:
pspc02000
]
Other transporters
Pores ion channels [TC:
1
]
Strain318_000852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
ShlB
GAS2
Motif
Other DBs
NCBI-ProteinID:
WKW14507
UniProt:
A0AA49JZ87
LinkDB
All DBs
Position
complement(961192..963399)
Genome browser
AA seq
735 aa
AA seq
DB search
MSRALLRALCCLALAAVPAAAQRDGCTRFRPRVERLAFEGNTSITNFDLAQILYTERAGR
LRRWFGWNVGPTACLDTLELGRDERRIAAWYNMRGYPGTTARAEVARTSSRTANVTFRVR
EAPPVVIDTVRLANVPRGLVDQARLVRALRGAPLDDSVLVATMDSVQQILRAEGYARARP
PTRSVTVDTAARRARVTLTFTPGPLMRVGAIEVAMTPNDSGRPALREDEVRALLRFESGD
VYSARSVGASQQLLYSYDLYRTVAIDTLPSRSTGDTLPVRVRLVEGRHNALRVGGGWGTI
DCFRTQSRFVEQNFLGRGHRLQLDLRLSKLGVGTPFDGAPGLCAPAVRADTFSLRLNYYV
GATVNLRGVLGDRWHPVGTLYSERRTEFQSYVRETSIGGIGSFDRPLVPRVNTTFAYRFD
AGRTTSDAAVSCATFGLCRFNDRFLLNSPSVMHAAGVTFSRSAPAITAFASNDERWAIES
RLGTVNVGRPGTRVNFNRTQLEYALYRPLTRTLVGAARLSAGFVATRRDLEAFVPPQERF
YSGGQNSVRGYNQGQLGPTVYIVRAPSDTVTVGGALVGNADPSAGFDRTAPAGGTATALL
NLELRSRVGWPSDLLRWVLFLDAGRVWNNSGNYAVTGLRATPGLGVRLVTPLGPFRVDVG
YNPHPREAGPAFYLQRASATTLGRAICVSPGSTEPLDDAAAGALGPVPCPASFRPLPPRG
LLPRLTFHFSIGEAF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcctccgtgcactctgctgcctcgcgctcgccgccgtcccggccgcc
gcgcagcgcgatgggtgcacgcgattccggccgcgcgtcgaacgcctcgcgttcgagggc
aacacgtccatcaccaacttcgacctcgcgcagatcctctacacggagcgcgcgggtcgc
ctgcggcgctggttcggctggaacgtgggccccaccgcctgcctggacacgctggagctc
ggccgcgacgaacgacgcatcgcggcgtggtacaacatgcgcggctatcccggcacgacg
gcacgcgccgaggtcgcgcgcaccagctcgcgcacggccaacgtgaccttccgcgtgcgc
gaagccccgccggtggtgatcgacaccgtgcgtttggccaacgtgccgcgcgggctggtg
gatcaggcgcgcttggtgcgcgcgctccgcggggcgccgctcgatgattcggtcctcgtc
gcgacgatggactcggtgcagcagatcctgcgcgccgagggctacgcgcgcgcgcggccg
ccgacccgcagcgtcacggtagacaccgccgcgcggcgggcgcgcgtcacgctcacgttc
acgccgggtccgttgatgcgcgtgggcgccatcgaggtcgcgatgacgcccaacgattcc
gggcgtccggcgctgcgcgaagacgaggtgcgcgccctgctgcggttcgagagcggcgac
gtgtacagcgcccgctcggtgggagcgagtcagcagctgctgtactcctacgacctgtac
cgcacggtcgccatcgatacgctgccctcccgcagcaccggcgacacgctgccggtgcgc
gtgcggctcgtcgaaggccggcacaacgcgctgcgcgtcggcggcggatggggcaccatc
gactgcttccgtacgcagagccgcttcgtggagcagaacttcctcgggcgcggccatcgc
ctgcagctcgacctccggctctccaagctcggcgtcggcacgcccttcgacggcgcaccg
gggctctgcgcgccggccgtacgcgccgacaccttcagcctgcgcctcaactactacgtc
ggcgcgacggtgaatctccgcggcgtgctcggcgatcgctggcatccggtgggcacgctg
tacagcgaacgccgcaccgagttccagagctacgtgcgcgagacgagcatcggcggcatc
ggcagcttcgatcgcccgctggtgccgcgcgtgaacaccaccttcgcgtatcgcttcgac
gccggtcgcaccacctcggatgccgcggtctcctgcgccaccttcggcctctgccgcttc
aacgaccgtttcctgctcaacagcccgagcgtgatgcatgccgcgggcgtgacgttctcg
cgctcggcacccgccatcaccgccttcgcgtccaacgatgagcgttgggccatcgagtcg
cgactcggcacggtgaacgtcgggcgccccggcacgcgcgtgaacttcaaccgcacgcag
ctcgaatacgcgctgtatcgcccgctgacgcgcacgctggtcggtgcggcgcgcctctcc
gcgggcttcgtcgccacgcgccgcgatctcgaggccttcgtcccgccgcaggagcgcttc
tactccggcggccagaactccgtgcgcggctacaaccaaggccagctcgggcccacggtc
tacatcgtgcgcgccccgagcgatacggtgaccgtcggcggcgcactcgtcggcaacgcc
gacccgagcgcgggcttcgatcgcacggcacccgcgggcggcacggcgacggcactgctc
aacctcgagttgcgctcgcgggtgggctggcccagcgacctgctgcgctgggtgctgttc
ctcgatgccggccgcgtgtggaacaactcgggcaactacgccgtgacggggttgcgggcc
acgcctggcctgggcgtgcgtctcgtcacgccgctcgggccgttccgtgtggacgtcggc
tacaacccgcatccgcgcgaggccggccccgccttctacctgcagcgagccagcgcgacg
acgctcggccgcgccatctgcgtgtcccccggttccacggagcccctggacgacgcggca
gcgggcgcgctcggccccgtgccctgccccgcctcgttccgtccgctgccgccgcgcggt
ctgcttccgcggctcacgttccacttcagcatcggcgaggccttctag
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