Pseudogemmatithrix spongiicola: Strain318_000890
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Entry
Strain318_000890 CDS
T10301
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc03030
DNA replication
pspc03430
Mismatch repair
pspc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Strain318_000890 (dnaX)
03430 Mismatch repair
Strain318_000890 (dnaX)
03440 Homologous recombination
Strain318_000890 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspc03032
]
Strain318_000890 (dnaX)
03400 DNA repair and recombination proteins [BR:
pspc03400
]
Strain318_000890 (dnaX)
Enzymes [BR:
pspc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Strain318_000890 (dnaX)
DNA replication proteins [BR:
pspc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Strain318_000890 (dnaX)
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Strain318_000890 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
AAA_30
RuvB_N
AAA_5
Rad17
ResIII
AAA_14
AAA_33
ORC-CDC6-like
AAA_7
Mg_chelatase
AAA_18
RNA_helicase
AAA_assoc_2
AAA_24
NACHT
AAA_2
TsaE
nSTAND3
SLFN-g3_helicase
DciA
AAA_23
DNA_pol3_delta_C
AAA_28
Laa1_Sip1_HTR5
AAA_16
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WKW14543
UniProt:
A0AA49JZ75
LinkDB
All DBs
Position
1004886..1006655
Genome browser
AA seq
589 aa
AA seq
DB search
MSLALARKYRPRKFADVAVQSHVANTLRNAILTDRVAHAYLFCGPRGTGKTTLARVLAMA
LNCERRREDREPCGDCPSCQRVWGGGASLDVVEIDAASNRGVDDARDLRERAMYAPSGED
RYKVYIIDEAHMLTREAWNALLKILEEPPPRVVFVFATTEPQKIQQAAAPVLSRVQRFDL
RRIGPADVKLRLATVLTQEGIAADDDALGMLARAADGSMRDALSLTDQVLSLGEGAVTAP
RVRDALGLVPEDEHLALLDLVIERRAGDVFAAVQRLADHGVDFPVLLSEFAEILRAQLAV
VLGGQLPDVSERLAEELPKRATHFAAGDLLRMLSLLVETEPQLKRSGQQQLLFETLLVRC
ALLDRTVQIEELLRGGGAGGAPSGGSPRSASGPSAGASAGAATARAPMRAAPPVARDAAA
PSRAEPASVAAPPPRPAALRERPVAAAPTVADVADVATQVAAPTALEINRVVEHWDAIVD
GIVRDGRALLGAALGHATPTAVTAAGVVTLMVDAEAQADLIVQQEAAILAALRKRFDPVT
RLNVQAAAADAAPRRLNERAVKADRMAMLRKQSPLLDAAVDALDLELLD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgccctcgcgcggaagtatcgcccccggaagttcgccgacgtggccgtgcag
tcgcacgtggcaaacacgctgcgcaacgcgatcctgaccgaccgtgtggcccacgcgtac
ctgttctgtggcccgcgcggcacgggcaagaccacgttggcccgcgtgctcgccatggcc
ctcaactgcgagcggcgccgggaggatcgcgaaccctgcggggactgcccgtcctgccag
cgcgtgtggggcggcggggcctcgctcgacgtcgtcgagatcgacgccgcctcgaaccgc
ggcgtcgatgacgcccgggacctccgcgaacgcgcgatgtatgcgccgtcgggggaagac
cgctacaaggtctacatcatcgacgaggcgcacatgctcacgcgcgaggcgtggaacgcc
ctcctcaagatcctcgaggagccgccgccgcgcgtcgtgttcgtgttcgccacgaccgag
ccgcagaagatccagcaggccgcggcgcccgtgctgtcgcgcgtgcagcgctttgacctg
cgccgcatcgggcccgccgatgtcaagctgcgcctggccaccgtgctcacgcaggaaggc
atcgcggcggacgacgatgccctgggcatgctcgcccgcgccgccgacggctcgatgcgc
gatgcgctctcgctcaccgaccaggtcctgtcgcttggcgaaggcgccgtcaccgcgccc
cgcgtgcgcgatgccctcggccttgtgcccgaggacgagcacctcgccctgctcgacctg
gtcatcgagcgacgcgccggcgacgtgttcgccgccgtgcagcgcctcgccgaccacggt
gtcgattttcccgtgctgttgagcgagttcgccgagatcctgcgcgcccagctggcggtg
gtgctcggggggcagctgcccgatgtctcggagcggctggccgaggaactgccgaagcgc
gcgacgcacttcgccgcgggcgacctgctgcgcatgctctccctgctcgtcgagacggag
ccgcaactcaagcgctcggggcagcagcagctgctcttcgagaccctgttggtgcgctgc
gcactgctcgaccgcacggtgcagatcgaagaactgctgcgcggcggcggggcaggaggc
gcgccctccggcggatcgccgcgcagcgcatcgggcccatcggcgggcgcgtcggcgggc
gccgccacggcccgtgccccgatgcgtgccgcgccgcccgtcgcgcgcgacgctgccgcg
ccgagccgcgcggaacctgcgagcgtggccgcgccgccgccgcgcccggccgcgctgcgc
gaacgccccgtcgccgcggccccgaccgtcgccgacgtcgccgacgtcgccacgcaggtt
gcggcgccgacggcactcgagatcaatcgcgtggtcgagcactgggacgcgatcgtcgac
ggcatcgtccgcgacggtcgcgcgctgctgggtgcggcgctcggacatgcgacgccgacc
gccgtcacggcggcgggcgtcgtcacgctcatggtcgacgccgaggcgcaagccgacctc
atcgtgcagcaagaggcggccatcctcgccgcgctgcgcaagcgcttcgatcccgtgacg
cggctcaacgtgcaggccgcggccgccgatgccgcgccgcgccggctcaatgagcgggcc
gtgaaggccgaccgcatggccatgctgcgcaagcagagcccgctgctcgacgccgccgtc
gatgcgctcgacctcgaactgctggactga
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