Pseudogemmatithrix spongiicola: Strain318_000944
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Entry
Strain318_000944 CDS
T10301
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_000944
Transporters [BR:
pspc02000
]
Other transporters
Pores ion channels [TC:
1
]
Strain318_000944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WKW14596
UniProt:
A0AA49JTF4
LinkDB
All DBs
Position
1062734..1064860
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AA seq
708 aa
AA seq
DB search
MRVLAILPVCLLALPLAAQGRPSPDSVRADSAQRLATQRVTVARGDAALDRVPWAVGTQR
VEQVRRGQATVGIDEALANIPGVVVANRYNYALDQRVSIRGAGSRANFGLRGVKVLLDGV
PQSLPDGQSQLTNVDLAAIGSVEVLRGSASSLYGNGSGGVIAFTTDLSSPTPLGVTLRHT
SGSFGLEKSQLRLAGRGERTLGMLSVSRTRVDGFRQYSAAETSQLLAALDRAIGANMTLQ
LRAGTAEVPKALNPGAQTQAEYDANPDSAALANVNRGASREVTQRYLSARLRGSMARGEW
SAALYGQRRFVDNALAVPPPGAPTAATSPRGTFSTLDRRVTGARVDVQRQLAEAWRLTTG
FDLQRSFDVRRNQAATGGRPTTPTDTLLLDQNEIVVSVGPFAQVQWEPTPTLTVSTGARW
DRLEFRVDDNFLTDGRDNTGSRLLTATTGHLGAVWRLREWIAPYANVATAFETPTTTELQ
VRPDGQGGFNPELGPQRLRTLEVGARGRWGARLTYELALFQVDAEDAIVQYLETSGRAFF
RNAGQTRSRGAELGLGLRATTWLELQAAYTLADYRFDEYILPLTSTTADTLDGNRLAGVP
ERALRLGARARWRATTVDVDHSTQGAMFGDDRNLVPVGSWGRGQLNLRVAHTAELRGWRV
EPFASVQNALDERYVGAVTLNGAFGRVLEGAPGRNWYVGVELAAPLLR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcctcgccatcctccccgtctgcctcctcgccctgcccctcgcggcgcagggc
cgcccatcgccggacagcgtccgagcggattccgcccagcggctcgcgacccagcgcgtg
accgttgcccggggcgacgccgcgctggaccgcgtgccctgggccgtgggcacgcagcgc
gtcgagcaagtgcggcgcggccaggcgacggtcggcatcgatgaggcgctcgcgaacatc
ccgggcgtcgtggtcgcgaatcgctacaactacgcgctggaccagcgggtgtcgatccgc
ggcgcggggagtcgggccaacttcggcctgcgcggcgtgaaggtgttgctcgacggcgtg
ccgcagtcgctgccggacggacagtcgcagctcaccaacgtggacctggcggcgatcggg
tcggtcgaggtgctgcgcggctcggcgtcatcgctgtacggcaacgggtcgggcggcgtg
atcgcattcaccacggatctcagctcgccgacgccgctgggtgtcacgctgcggcacacg
agcggctcgttcgggctcgagaagtcgcaactgcggctcgccggccgcggggagcgcacg
ctgggcatgctcagcgtgtcccgcacgcgcgtggatggcttccgccagtacagcgcggcg
gagacctcgcaactgctggcggcgctcgaccgcgccatcggcgccaacatgacgctgcag
ctgcgcgccggcacggcggaagtgccgaaggccttgaatccgggggcgcagacgcaggcg
gagtacgacgcgaatcccgacagcgccgccctggccaacgtgaatcgcggcgcgagccgc
gaggtcacgcagcggtatctctcggcgcggctgcggggcagcatggcgcgaggcgagtgg
agcgcggcgctgtacgggcagcgccgcttcgtggacaacgccctcgccgttccgcctccg
ggtgcgccgacggccgcgacctcgccgcgcggcacgttcagtacgctcgaccgccgcgtg
acgggcgcgcgcgtcgatgtccagcggcagctggcggaggcgtggcgactcacgacgggc
ttcgacctgcagcgcagcttcgacgtgcggcgcaaccaggcggcgacggggggacggccg
acgacgcccacagacacgttgctgctcgaccagaacgagatcgtcgtcagcgtcgggccg
ttcgcgcaggtgcagtgggagcccacgcccacgctcacggtcagcactggcgcacgctgg
gatcgcctggagttccgggtcgacgacaacttcctgaccgacgggcgcgacaacacgggc
agccgtctgctcaccgcgacgaccgggcaccttggcgcggtgtggcggctgcgggagtgg
atcgcgccgtacgcgaacgtggccacggccttcgagacgccgacgacgacggagctgcaa
gtgcggccggacgggcaggggggattcaatcccgagctcggcccgcaacgactgcgcacg
ctcgaggtcggtgcgcgcggacgttggggcgcgcggctgacctacgagctggcgctgttc
caggtcgacgccgaggacgcgatcgtgcagtacttggagacctctggtcgcgcgttcttc
cgcaacgcggggcagacacggagccgcggcgcggagctggggctcgggctgcgcgcgacg
acctggttggagctgcaggcggcgtatacgctggcggactatcgcttcgacgagtacatc
ctgccgctcacgagcacgacggccgacacgctggacggcaatcgcctcgccggggtgccc
gagcgcgcgctgcggctcggtgcgcgggcccgctggcgcgcgacgaccgtcgatgtggac
cacagcacgcagggcgcgatgttcggcgacgatcggaatctcgtgccggtgggcagctgg
gggcgtgggcagctcaacctgcgcgtcgcgcacacggccgagctgcgcggctggcgcgtg
gagcccttcgccagcgtgcagaacgcgctcgacgagcgctacgtgggggccgtgacactg
aatggtgccttcgggcgcgtgctcgagggcgcgccgggtcgcaactggtatgtgggcgtg
gagctcgccgcgccgctgctgcgctga
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