Pseudogemmatithrix spongiicola: Strain318_001018
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Entry
Strain318_001018 CDS
T10301
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspc03036
]
Strain318_001018 (smc)
Chromosome and associated proteins [BR:
pspc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Strain318_001018 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WKW14665
UniProt:
A0AA49JYM8
LinkDB
All DBs
Position
complement(1142474..1145995)
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AA seq
1173 aa
AA seq
DB search
MRLTKLELHGFKSFADPVFLTFEPGATAIVGPNGCGKSNVSDAVRWVLGEQRARLLRGGK
MEDVIFQGSSARRATNVAEVSLHFENSDGMLPVPFQEVVITRRLSRSGESEYFLNRAPCR
LRDIHDLVRGTGLGADSGVVIESKMIDALLSDRPDDRRELFEEAAGVGLYRDRRRTTERQ
LEATSGDLVRIDDLTSEVQTQVRSLLRQRNKAEKAAGLTTRRFAVELTLASREMASWQQE
LADLDERLGGLRDALPLKHEAVRAAEVARDLAQAARAAAETARQERAIVAAQARQSVLEL
QQELAVAEERHRNALTRRERAQQERQEGAAFGDRLQGEMDAAQAEETLCAEQLHEALEVL
RTKVAAEEEARGTVSAARQSADAADRVVRELRDTARRLELERENAERELADVAQRTAALV
AEHEALTARLQLAERELSSADEQLVMAREAAAQAEAALEQSRAAAREARDREAAARADVR
RVEEEHTAVQGRLAALEGLERERVGLAPAAAKLLRERERFGSDAVLGPLSDFIGADAAVA
AQIERFLGATVHAVVVRDRAAADAVRQWHSETNPGALLLLPLDALHDGNGSFDADELAAR
VRAEGAGGGWVRALLGKVKATTDGTGFIDARGAMWLPAKDAGSAGPLTRRAELEELRATL
ANVDVRRAEVQSRAQAVHAEVVQAEAAAATAADNAAAAQQSLAQASQVRSERDRVRERAA
RELADAVALQERLAGRHTELGDRVNASLVRQEETAQKLLEADESSTAARGLLGTAERAQD
EAREARAAQQVAHAQAEARRQVATERRERLARERAAAADRLVALEREMQALAEQDGQLEQ
QMGVWQQELEARRASQAEADQALAGAEQAVRETESELQAAVAALDAARVDANASSETLHV
AELRHTELSGKRTAIRERLETEWRRPLDELFANYEPVDAEDEALRIEADDLRKQLEALGP
VNPLAIEEHEEETKRLEFLTTQRADLVEAQAKLQQAIKEIDVTARDLFLATFAQVRAHFR
EIFMTLFGGGECDLRLEDPERPLDCDIEIHASPRGKRTQRIHLLSSGERALVALSLLFGI
FLTKPSPFCLLDEVDAPLDDQNIGRFVRMLNEFKKKTQFIVITHNPRTTTEAADAVYGVT
MQEPGVSSLVSVRMRGPAVDATEAEPAGAAGPA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttgaccaagctcgagttgcacggcttcaagtcgtttgccgatccggtgttcctg
actttcgagccgggagcaacggccatcgtgggcccgaacggctgcggcaagtcgaacgtc
tccgacgccgtgcgctgggtgctcggtgaacagcgcgcccgcctgctgcgcggcggcaag
atggaagacgtcatcttccagggcagctcggcgcgccgcgccaccaacgtggccgaagtc
tcgctgcacttcgagaactccgacggcatgctgcccgtgccgttccaggaagtcgtcatc
acgcgccgcctctcgcgctcgggtgagagcgagtacttcctgaaccgcgccccctgccgc
ctgcgcgacatccacgatctcgtgcgtggcaccggcctcggtgccgactccggcgtcgtc
atcgagagcaagatgatcgacgcgctgctctccgaccgccccgacgaccgtcgggagctg
ttcgaggaagcggccggcgtcggcctctatcgcgatcgccgtcgcaccacggaacgccag
ctcgaggcgacctcgggcgacctcgtccgcatcgacgacctcaccagcgaagtgcagacg
caggtgcgttcgctgctccgccagcgcaacaaggcggagaaggccgccggcctcaccacg
cgtcgcttcgccgtcgagctcacgctcgcctcgcgcgagatggcctcgtggcagcaggag
ctggccgacctcgacgagcgcctcggcgggcttcgcgacgcgctgccgctcaagcacgaa
gccgtgcgcgccgccgaagtcgcgcgcgacctcgcacaggccgcccgcgccgccgccgag
acggcgcggcaggagcgcgccatcgtggccgcgcaggcgcgccagagcgtgctcgagctg
cagcaggaactcgccgtcgccgaagagcgccaccgcaatgcgctcacgcgccgcgagcgc
gcgcagcaggagcgccaggaaggcgccgccttcggcgatcgcctgcagggcgagatggac
gccgcgcaggccgaagagacgctgtgcgccgagcagttgcacgaggcactggaagtgctg
cgcacaaaggtcgccgcggaggaagaagcgcgcggcaccgtttccgccgcacgtcagagc
gccgatgccgccgatcgcgtcgtgcgcgagctgcgcgacaccgcgcgccgcctcgagctg
gagcgcgagaacgcggagcgcgagctggccgacgtcgcgcagcgcaccgctgcgctcgtc
gccgaacacgaggcgctcacggcgcgcctgcagttggccgagcgtgagctcagcagcgcc
gacgaacagttggtcatggcccgcgaggctgctgcacaggccgaggccgcgctggagcag
tcgcgcgctgcagcccgcgaagcgcgcgaccgtgaagccgccgcccgcgccgacgtgcgc
cgggtggaagaggagcacaccgccgtgcagggccgcctcgccgccctcgagggccttgag
cgcgagcgtgtgggcctcgcgccggccgccgccaagttgctgcgcgagcgtgagcgcttt
ggcagtgatgccgtgctcggtccgctctcggacttcatcggtgccgacgccgcagtggcc
gcgcagatcgagcgcttcctcggcgccaccgtgcacgccgtggtggtgcgggaccgcgcc
gccgccgacgccgtgcgccagtggcacagcgagaccaaccctggtgccctgctgctcctg
ccgctcgatgcgctgcacgatggcaacggcagcttcgacgccgacgaactcgccgcgcgc
gtgcgcgccgagggcgccggtggcggctgggtacgggcgctgctcgggaaggtgaaggcg
acaacggacggtacgggcttcatcgacgcccgcggtgcgatgtggctgcccgccaaggat
gccggctccgctggcccgctcacgcgccgcgccgagctcgaggagctgcgcgcgacgctg
gccaacgtcgatgtgcgtcgcgctgaggtccagtcgcgcgcgcaggccgtgcatgcggag
gtcgtgcaggccgaagcggccgctgccaccgccgccgacaacgcggccgccgcgcagcag
tcgctggcgcaggcctcgcaggtgcgctcggagcgcgaccgcgtgcgtgagcgtgcggcg
cgcgagctcgccgacgccgtcgcgctgcaggagcgcctggccggccgccacaccgaactc
ggcgaccgcgtgaatgcgtcgctggtgcggcaggaagagaccgcccagaagctgctcgag
gcggatgagtcgtccaccgccgcacgcggcctgctcggcaccgccgagcgcgcgcaggac
gaggcccgcgaagcccgcgccgcgcagcaggtggcgcatgcgcaggccgaagcgcgtcgt
caggtggccacggagcgtcgcgagcgcctggcgcgcgagcgcgccgccgcggccgatcgc
ttggtggcgctggagcgcgagatgcaggcgctggccgagcaggatgggcagctcgaacag
cagatgggtgtgtggcagcaggagctcgaggcacgtcgggcgtcgcaggccgaggccgac
caggccctcgctggcgccgagcaggcggtgcgcgagacggaatcggagctccaagcggcg
gtggccgcactcgacgccgcgcgcgtggacgccaacgccagcagcgagacgctgcacgtg
gccgaactgcggcacacggagctctcgggcaagcgcaccgccatccgcgagcgcttggag
accgagtggcgtcgtccgctggacgagctgtttgcgaactacgagcctgtggacgccgag
gacgaggcgctgcgcatcgaagccgacgacctgcgcaagcagctcgaggcgctcggcccg
gtgaacccgctggccatcgaggagcacgaggaggagaccaagcgtctcgagttcctcacg
acgcagcgcgcagacctggtggaagcgcaggccaagctgcagcaggccatcaaggagatc
gacgtcacggcgcgcgacttgttcctcgcgaccttcgcgcaggtgcgggcgcacttccgc
gagatcttcatgacgctgttcggcggcggcgagtgcgacctgcgcctcgaagacccggag
cggccgctggactgcgacattgagatccacgccagcccgcgcggcaagcgcacgcagcgc
atccacctgctctcgagcggggaacgcgccttggtcgccctgtctttgttatttggcatc
ttcttgaccaagcccagcccgttctgcctgctggacgaagtcgatgccccgctcgacgac
cagaacatcggccgcttcgtgcggatgctcaacgagttcaagaagaagacgcagttcatc
gtgatcacgcacaatccgcgcacgaccaccgaggcggccgatgccgtctacggcgtgacg
atgcaggagcccggggtgtcgtcgctcgtatccgtgcgcatgcgcgggccggcggtggac
gcgaccgaggcggaaccggcgggcgccgcaggccccgcgtaa
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