Pseudogemmatithrix spongiicola: Strain318_001084
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Entry
Strain318_001084 CDS
T10301
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Strain318_001084
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspc01007
]
Strain318_001084
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspc03016
]
Strain318_001084
Enzymes [BR:
pspc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Strain318_001084
Amino acid related enzymes [BR:
pspc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Strain318_001084
Transfer RNA biogenesis [BR:
pspc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Strain318_001084
Prokaryotic type
Strain318_001084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
CBP66_2nd
Antimicrobial14
Motif
Other DBs
NCBI-ProteinID:
WKW14728
UniProt:
A0AA49Q4F1
LinkDB
All DBs
Position
complement(1209366..1212131)
Genome browser
AA seq
921 aa
AA seq
DB search
MPETPDQSAEFPTHFDFAATEPALSRAWDEAGLFRADAGRTTRLGGDRDPFTVLIPPPNV
TAVLHVGHGLNNTVQDVLIRWRRMAGDEALWLPGTDHAGIATQNVVEKLLAKDGKTRFDL
GRDAFVKRTEQFVEETGGIILKQLRNIGASADFSRTAYTFDPDRSRAVREAFVRLYEQGL
VYRGHRVIHWCPRCLTSLSDEEAEFHDSEGALHHVRYAFADDPSNGITIATTRPETILAD
VAIAVHPDDERYAAFVGKDVLLPVTGIRMPVIADSYVEKDFGTGALKITPAHDANDFEVG
KRHGLGMPVVIDMHGKMGEVAEAQGRVPAAYAGLDRFAARKEIVKALEASGHLVKIEKHA
NSIRKCYRCETVVEPRLSDQWFVKMAPLAAPALQAVKDGTIRLLPEKWEKVYINWLEGIR
DWNISRQLWWGHRVPVFTCANGHADAYREDPTACRQCGAAIVAQDEDVFDTWFSSWLWPI
STMGWPNENAKDLKAFFPSDVLVTAPEILFFWVARMIMSGYAFQGKPPFHTVYLHGTVRD
MQHRKMSKSLGNGIDPLDVVDRYGADALRWTLIQGMGLGVDVMLDPNDLDKSFAPGRNFA
TKLWNIGRFLLLQVGDEPIGRFEDIDASTLRLEDRWILGRLDAAIAEGDAALGPARPAAD
HWPEQQRQQGMRLDAYAEAARRFVWNELADWYVEAVKPRLAQPGADRETARRVLVHVFDQ
GLRLLHPIMPFVTEALWQRLPSRTPGAFIAVAAWPSMRGAGADAGVAFDAVREAIDAIRG
LRSEYGVQPGAPIKAFVARGGASAEAFAALTDSAVLLQRLARCEVSADAPPTGAAAHAVL
ASKLELTLPLAGMVDLGKERARLSGEIENLSKQLEALRGRLSNEKFTAKAPPAVVEAERA
KEREWADRVAQMTQKLAELGA
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagacgcccgaccagtctgccgagttcccgacccacttcgatttcgccgccacc
gaacctgcgctgagccgcgcctgggacgaggccggcctgttccgcgccgacgccggccgc
accacgcgcctgggcggcgaccgcgatccgttcaccgtgctcatcccgccgcccaacgtg
acggcggtgctgcacgtgggccacgggctcaacaacaccgtgcaggacgtgctcatccgc
tggcgccgcatggccggcgacgaggcgctctggctccccggcaccgaccacgccggcatc
gctacgcagaacgtcgtggagaagctgctcgccaaggacggcaagacgcgcttcgacctg
ggacgcgacgccttcgtgaagcgcaccgagcagttcgtggaggagacgggcggcatcatc
ctgaagcagctgcgcaacatcggcgcctccgccgacttctcgcgcacggcgtacacgttc
gaccccgaccgctcgcgggccgtgcgcgaagccttcgtgcggctgtacgagcagggcctg
gtctaccgcggccatcgcgtcatccactggtgcccgcgctgcctcacctccctctccgat
gaggaagcggagttccacgactccgaaggcgcgctgcaccacgtgcgctacgccttcgcc
gacgatccgtccaacggcatcacgatcgcgaccacgcggcccgagaccatactcgccgac
gtggctatcgccgtgcaccccgacgacgagcgctacgccgccttcgtgggcaaggatgtg
ctcctgcccgtgacgggcatccgcatgccggtcatcgccgacagctacgtcgagaaggac
ttcggcaccggcgcgctcaagatcacgcccgcccacgacgccaacgacttcgaggtcggc
aagcgccacgggctcggcatgccggtggtcatcgacatgcacggcaagatgggcgaagtc
gccgaggcccagggccgcgtgccggcagcgtacgcgggcttggatcgcttcgccgcgcgc
aaggagatcgtgaaggcgctggaagccagcgggcatctcgtgaagatcgaaaagcatgcc
aactcgatccgcaagtgctaccgctgcgagacggtcgtcgagccgcggctgagcgatcag
tggttcgtgaagatggccccgctcgccgcacccgcgctgcaggcggtgaaggatggcacc
atccgcttgctccccgagaagtgggagaaggtctacatcaactggctcgagggcatccgc
gactggaacatctcgcggcagctctggtgggggcaccgcgtgccggtgttcacctgcgcc
aacggccacgccgacgcgtaccgcgaggaccccaccgcgtgccgccagtgcggcgccgcg
atcgtcgcgcaggacgaagacgtgttcgacacgtggttctcgtcctggctgtggcccatc
agcacgatgggctggccgaatgagaacgcgaaggacctcaaggccttcttccccagcgac
gtgctcgtcaccgcgccggagatcctgttcttctgggtcgcgcgcatgatcatgagcggc
tacgccttccagggaaagccgccgttccacaccgtgtacctgcacggcaccgtgcgcgac
atgcagcatcgcaagatgagcaagtcgctgggcaacggcatcgatccgctcgacgtcgtg
gaccgctacggcgccgacgcgctgcgctggacgctcatccaaggcatgggccttggcgtg
gacgtcatgctcgacccgaatgacctcgacaagtccttcgcgcccggccgcaacttcgcc
accaagctctggaacatcgggcgcttcctgctgctgcaggtgggggatgaacccatcggc
cgcttcgaggacatcgacgcctcgaccctacgcctcgaagaccgctggatcctcggccgc
ctcgacgccgccatcgccgagggcgacgcggcgctgggcccggcgcgtcccgccgcggac
cactggccggagcagcagcgccagcagggcatgcgcttggacgcctacgccgaggcggcg
cgccgcttcgtgtggaacgagctcgccgactggtacgtggaagccgtgaagccgcggctc
gcccagcccggcgcggaccgcgagaccgcgcgccgggtactggtgcatgtgttcgaccaa
ggcctgcgcctcctgcacccgatcatgcccttcgtgacggaagcgctctggcagcgcctg
ccgtcgcgcacgccgggcgcgttcatcgccgtggcggcgtggccgagcatgcgtggcgcc
ggtgccgacgccggcgtggccttcgacgccgtgcgcgaagccatcgatgccatccgcggc
ctgcgcagcgagtacggcgtgcagccgggcgcgccgatcaaggccttcgtcgcgcgcggc
ggcgcgagcgccgaagccttcgcggcgctcacggacagcgccgtgctgctgcagcgcctc
gcgcgctgcgaggtctccgccgatgccccgcccaccggcgccgcggcacacgccgtgctc
gccagcaagcttgaactcacgttgccgctcgccggcatggtggacctcggcaaggagcgt
gcgcgcctcagcggcgagatcgagaacctcagcaagcagttggaggcactccgcggccgc
ctgagcaacgagaagttcacggccaaggcgccgccggcggtggtcgaggctgaacgcgca
aaggagcgcgagtgggcggatcgcgtcgcccagatgacgcagaagctcgcggagctgggc
gcctga
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