Pseudogemmatithrix spongiicola: Strain318_001178
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Entry
Strain318_001178 CDS
T10301
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_001178
Transporters [BR:
pspc02000
]
Other transporters
Pores ion channels [TC:
1
]
Strain318_001178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Plug
CarbopepD_reg_2
EMC7_beta-sandw
fn3_3
SpaA
Motif
Other DBs
NCBI-ProteinID:
WKW14819
UniProt:
A0AA49Q7K9
LinkDB
All DBs
Position
1303361..1305598
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AA seq
745 aa
AA seq
DB search
MRRALLLFATVLLAPIAATTGSAATLAGKVHGIVTDSAGVALPNATVIVAELGRATTTDA
EGKFTIRGVPVGDYHLSVMLLGYAPGHLVVRVPAEDSEVLATIRLTATPLRLTAMVVAAS
PTGTESDRLTQAALELSGRSLSRALGSSVAASLAGEPGVSQRYSGPVATMPVIRGLTGDR
ILILQDGERAGDLASSAADHGISVDPLAAQRLEVVRGPATLLYGNSALGGVVNVVSNDIP
TAVPGHFEGYVATQGETVTPGGAFSAGGTMAVGDRSAVSVRAGLRELGGLRTGGGTTLSG
TDSRALNATVGYGLIGERANAGLALRVYDFEYGIPSAPGDPRAGVRLNGRRVGLSGKGGV
QLRSRRISYLRVEGTVQDFAQDEIEPGGEVGTSFSLKTQTLNAQATTGFGRVKGALGVQG
LFKQYAASGEEALTPGANSVGLGIFLFQEIALSRLRDHDSGTQLQIGARWDRYAISSDAG
NAKCGPAQTSAFNNFSGSLGASVRLSDAFSLSGSLASAFRAPTVEELHSNGVHAANGSYD
VGNPSLRAERSLGAELIARLRSGRVSAQVAAYSNAISNYVTTDFLSDTIVDGTPMPLARF
VQANASLRGVEGSIETRVGEAWVASLSGDLVRGALADGGGPLPFLPPARIGGGLRWELAR
RFVATDIRHGFKQDRVTGGVDAATAAYTLVNVSAGQQWLVGNVLHRMTLRVDNLADARYF
DAASRIKRFAANPGRNVSLIYQLQF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcgcactcctgttgttcgccaccgtcctcctcgctccaatcgccgcaacgact
ggctcggccgccacgctggcgggcaaggtccacgggattgtcaccgattccgctggcgtc
gcgcttcccaatgctacggtgatcgtcgctgagctcggccgcgctacgacgaccgatgct
gaagggaagttcaccattcgtggagtcccggtcggcgattatcatctgagtgtcatgctc
ctcggatacgcgccgggacatctggtggtgcgcgtgccggccgaggattctgaggtgctc
gcgacgattcgcctcaccgccacccccctgcggctcacggcgatggtcgtagcggcatca
cccaccgggaccgagtcggaccgtctcacgcaggcggcgctggaactctcggggcgttcg
ctgtcgcgtgcgctcggctcctcggtggccgcgtccctggccggagaacccggtgtgagt
cagcgctattcaggaccagtagcgacgatgccggtcattcgcggactcactggcgaccgg
atcctcattcttcaggatggtgagcgagcgggcgacctcgcgtcttcggctgcggaccac
ggcatctctgtagacccgctcgcggcgcagcggttggaggtggtgcgcggaccggccaca
ctgctatacggcaacagcgcgctgggcggggtcgtaaatgtggtatcgaatgacattccg
actgcggtgcccgggcacttcgaaggatatgtcgcgactcagggcgagacagtcacgccc
ggaggcgcgttcagcgccggaggcacgatggccgtcggcgaccgcagcgcagtctcggtg
cgcgccggattgcgagagcttggaggcctgcgcaccgggggtggcaccacgctctcaggc
accgactcgcgcgcgctcaacgctacggtcggatacgggctgatcggcgagcgggcgaac
gcgggactcgcgctgcgcgtctacgacttcgaatacgggatcccgtctgcgccgggagac
ccgcgggccggggtgcggctcaatggtcggcgcgtcggcctgagcggcaaggggggcgtg
cagctacgctcacgccgtatttcgtaccttcgtgtggaggggacggtccaagacttcgcg
caggatgagattgagcccggcggcgaggtggggaccagcttctcccttaagactcagacg
ctgaacgcgcaggcgacgaccgggttcgggcgggtaaagggcgcgctcggagtacaaggg
ctctttaagcagtacgcggcgagcggagaggaggctcttacccccggcgccaactcagtc
ggtctcgggatcttcttgttccaagagattgccctgtcccgcctgcgggatcacgactcg
ggcacgcagttgcagattggggcgcgatgggaccggtacgcaatttcatctgacgcgggg
aacgcaaaatgcggtccggcgcagacgagcgctttcaataacttctccggttcgctcggt
gccagtgttcggctctctgacgcattcagtctcagcggctcccttgccagcgcgtttcgc
gcgccgactgttgaggagttgcactccaacggggtgcacgccgcgaatgggagctacgac
gtgggcaacccatcgctgcgtgccgagcgaagtctgggtgcggaactcattgcgcgcctg
aggagcgggcgcgtgagcgcgcaggtcgccgcgtacagcaacgcaatcagcaattacgtc
acaacggactttctgtcggacacgattgtggatggcacgccgatgccgctcgcgcgcttc
gtgcaggccaacgcgtcgttgcgcggcgtggagggcagcatcgaaacgcgggtaggcgag
gcgtgggtcgcgagtctttcgggtgacttggtgcgaggggcattggccgacgggggcggg
ccactccctttcctgccgcctgcccggatcggcggcggcctgcgctgggagctcgcccgt
cggttcgtggccacggacatccggcacggattcaagcaggatcgcgtgacgggcggcgtg
gacgctgcgaccgcggcgtatacgctggtgaacgtgagcgccggacagcagtggctcgtc
ggcaacgtcctacatcggatgacgctgcgcgtcgacaatcttgcggacgcgcgctacttc
gacgcggcgagtcggatcaagcgctttgcggccaatccgggtcggaacgtgagtctgatc
taccagcttcagttctga
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