Pseudogemmatithrix spongiicola: Strain318_001274
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Entry
Strain318_001274 CDS
T10301
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00470
D-Amino acid metabolism
pspc00550
Peptidoglycan biosynthesis
pspc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Strain318_001274 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Strain318_001274 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pspc01011
]
Strain318_001274 (murD)
Enzymes [BR:
pspc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Strain318_001274 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pspc01011
]
Precursor biosynthesis
Amino acid ligase
Strain318_001274 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
DUF6134
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
WKW14911
UniProt:
A0AA49JUA7
LinkDB
All DBs
Position
1418202..1419602
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AA seq
466 aa
AA seq
DB search
MPRVLQASGPVAALAAAGREAAVVGVGRSGAAAARLLRAAGVAVYASDAGAGAKLTPLAD
ALRTEGIDVQLGGHDLARIAKAGVVVVSPGVPPDVPPLRAAREAGVPIISEVELALHHLP
ASVRYIGITGTNGKTTVTAMVAQLLSAVGVNAEEAGNIGTPLSEIALREALPAWISLELS
SFQLADTPSVKPAVAVLTNLAPDHLDRYPDLESYYRDKDRLFRNLDGLSVRVVNRDDAEV
MRRTATVRGDAKTFSVERRDTDAWYDADARWLMLAGERLLARDEFPLLGLHNVANALTAA
LAVHSALPEARSADGRARLASGLRSFVAPPHRLEKVGEFDGVLWINDSKATNVGASRVAI
AGMERPTVLLLGGRHKGEPYSNLLDVMRGRVKAVVAYGEAEDLVVADLTGHVPVERGGSS
FDTVLAKARALAAPGDAILLSPACSSYDMFNNYEERGATFRAMASR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgtgctgcaggcgtcgggtccggtggccgcgctcgcggcggcggggcgggaa
gccgcagtcgtcggcgtgggacggagcggggccgcggcggcgcgcttgctgcgcgcggcg
ggcgtcgccgtctacgcgtcggacgcgggcgccggcgccaagctcacgccgctcgccgat
gcgctgcgcaccgagggcatcgacgtgcagctgggcgggcacgacctggcgcgcatcgcg
aaggctggagtcgtggtcgtgagcccgggcgtaccacccgatgttccgcccctgcgcgcg
gcccgcgaggccggcgtgccaatcatcagcgaggtcgagctggcgttgcaccacctgccg
gcgagcgtacgctacatcggcatcaccgggaccaacggcaagaccaccgtcacggcgatg
gtcgcgcagctgctgtcggcggtcggcgtaaacgccgaagaggccggcaacatcggcacg
ccactcagcgagatcgcgctgcgcgaggcgctcccggcatggatctcgctggaactgagt
tcgttccagctcgccgatacccccagcgtgaagccggccgtcgcggtgctgaccaacctc
gcgcccgaccatctggatcgctatccggacctcgagagctactatcgcgacaaggaccgc
ctgttccggaacctcgatgggctcagcgtccgcgtggtgaaccgcgacgacgccgaggtc
atgcgacgcaccgcgacggttcggggcgacgcgaagaccttcagcgtcgagcggcgcgat
accgacgcctggtacgacgcggacgcacgctggctcatgctggccggtgagcgcctgctt
gcgcgagacgaattcccgctgctcgggctgcacaacgtcgccaatgcgctcaccgccgcg
ctggcggtgcacagcgcgctgcccgaggcgcgcagcgcggacggccgcgcccggctggcg
tccggcctgcgcagcttcgtcgcgccaccgcatcggctggagaaggtgggcgagttcgat
ggcgtactgtggatcaatgattccaaggcgacaaacgtcggcgcctctcgcgtggcgatc
gccggcatggagcggccgaccgtgttgctcctcggcggacgtcacaagggcgaaccctat
tccaacctgctggacgtgatgcgcggccgcgtgaaggccgtggtcgcgtatggggaagct
gaagacctcgtcgtcgcggatctcaccggccacgtgcccgtggagcggggcggatcgtct
ttcgatacggtcctcgcgaaggcccgtgcgctcgccgcgccgggtgacgcgatcctgctg
tctcccgcctgttcgagctacgacatgttcaacaactacgaagagcgcggcgcgaccttc
cgcgcgatggcgtcgcgatga
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