KEGG   Pseudogemmatithrix spongiicola: Strain318_001315
Entry
Strain318_001315  CDS       T10301                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pspc  Pseudogemmatithrix spongiicola
Pathway
pspc00740  Riboflavin metabolism
pspc01100  Metabolic pathways
pspc01110  Biosynthesis of secondary metabolites
pspc01240  Biosynthesis of cofactors
pspc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pspc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Strain318_001315 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Strain318_001315 (ribD)
Enzymes [BR:pspc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Strain318_001315 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Strain318_001315 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: WKW14952
UniProt: A0AA49Q7D3
LinkDB
Position
1468118..1469215
AA seq 365 aa
MTPADAAQDAAFMRRALDLARRGWGQTAPNPMVGAVVVRDGEVIAEGFHARFGGPHAEAA
ALAALPKKGARDAVVYVTLEPCAHHGKTPPCADALIKAKVRRVVIACTDPNPVAAGGIVK
LRSAGIEVDVGIEQQAAEELNAPFLRAARRRDRPFITLKLALSAEGAIARADGRQQWLTG
PQAKREVHRLRAGADAILVGIGTVLADDPALTVREWPEPRVAPWRLVLDRRARLPLTSQL
VKTAREVAVGVLAERPDPSTMAALTAAGVEVSVAPDLGGHLRALRSRGVQHILAEPGDRV
ATALLEGGFVDRLIIFRTSVPLGPDTLAAVGKVLPPVEGGAGWSVLAEQDLGADRMTIYR
NDAPR
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgactccagcggacgccgcgcaggacgcggccttcatgcgccgcgcgctcgacctggcg
cggcgcggctggggccagacggcgccgaaccccatggtcggcgccgttgtcgttcgcgac
ggcgaagtcatcgcggaaggctttcacgcgcgctttggggggccgcacgccgaggccgcc
gcgcttgcggcgctgccgaagaagggtgcgcgcgacgccgtcgtgtacgtcacgctcgaa
ccgtgcgcgcatcacggcaagacgccgccctgtgccgacgccctgatcaaggcgaaggtg
cgccgcgtcgtcatcgcctgcacggatccgaatccggtggcggcgggcggcatcgtgaag
ctgcgaagcgccggtatcgaggtcgatgtgggcatcgagcaacaggccgccgaggagctc
aacgcgccgtttctccgcgcggcgaggcgccgcgaccgtcccttcatcacgctcaagctc
gcgctctcggcagagggagcgatcgcgcgggcggacggccgccagcagtggctcacgggc
ccccaggccaagcgggaggtgcaccgcctgcgcgccggggcggatgccatcctggtcggc
attggcacggtgttggccgacgatcccgcgctcaccgtgcgcgagtggccggaaccgcgc
gtcgcgccgtggcgcttggtcctcgaccggcgcgctcgcttgcctctgacgagccagctc
gtgaagacggcgcgggaggtggcggtgggcgtactggctgagcgcccggacccgtcgacg
atggcggcactcacggcggcgggggtggaggtgagcgtcgcgcccgatctcgggggacac
ctgcgggccctccgcagccggggcgtccagcacatcctcgccgagcccggcgaccgtgtg
gccacggccctgctggagggcggattcgtggaccgcctgattatctttcggacgtcggtc
ccgctggggcctgacaccctcgccgcggtcgggaaggtcctgccgccggtcgaggggggc
gcggggtggtcggtgctcgccgaacaggatctcggcgcggaccgcatgaccatctaccgg
aacgacgcgcctcgctga

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