Pseudogemmatithrix spongiicola: Strain318_001335
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Entry
Strain318_001335 CDS
T10301
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspc02000
]
Strain318_001335
Transporters [BR:
pspc02000
]
Other transporters
Pores ion channels [TC:
1
]
Strain318_001335
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WKW14972
UniProt:
A0AA49K046
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All DBs
Position
1484647..1486566
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AA seq
639 aa
AA seq
DB search
MKHAFLLLAALPGLLTAQDSLPATVITATRLPTPINAQTAAVTVLDAQLLRAEGVTHVGD
ALRRVPGIAMARSSGIGSQHTVFMRGGQGNYVRVLVDGVAINEPGGTLDLGRLTLDDVER
IEVVRGPASVLYGSEAVTGVIQIITRRGAGAARLRSEFGGGSFGTVRGSLGASGALGRLG
WTLQGDRHAMDGVLDFNNAYRNDGISGALDLAADAKTDIRLTGRFNNSMYQYPTGSAGTL
VDRNAERTENRVLAGLDVGRRWTDRVETRAQYTWMDLLPRTNDGPDTPGDTLGFYGFFAR
GAVKRRMADARTTLRVGDAQFLTLGAEWARDQERSTSVSQSQFGDFPDTLRAARENRALY
AQALGERGRLSYTVGARLDENSAFGSFRTARLGAGWRIADGLRVRSSAGTAFKAPNFFEN
FAGGFTVGNPDLRPEESRSADLGIDATLATGVRLSITGFAQRFKNMIQYNGAVPFGSPNY
ENIVAANAGGVEAEVTLPSVGGVETQIGHTWTSTRVAQSGFDTTASATFVRGGKLLRRPA
NVTTLQLRRALGTQGNVSAVIVRTGEREDRDFASFPAGVVVLGGFTTVDLAADLRLPGRL
GETGRLVLRADNVTDVQFTQIQGFRSPGRILYAGLRLER
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcacgccttccttctcctcgccgcactacccggtctcctcaccgcgcaggactcg
ctgcccgcgacggtcatcaccgccacgcggctgcccacgccgatcaatgcccagacggcc
gccgtcacggtgctcgatgcgcaactgctccgcgcggagggcgtcacgcacgtgggcgac
gcgctgcggcgtgtgccaggcatcgcgatggcccgcagctccggcatcggctcgcagcac
accgtcttcatgcgtggcggccagggcaactacgtgcgcgtgctcgtggacggcgtggcc
atcaacgaacccggcggcaccctcgatctcggacgcctcacgctcgatgacgtcgaacgc
atcgaggtggtgcgcggcccggccagtgtgctctatggctcggaggccgtgacgggcgtc
atccagatcatcacgcgccgcggcgcgggggccgctcgcctccgcagcgagttcggcggc
ggctccttcggcaccgtgcgcggatcgctcggcgccagcggggccctcggtcgtctcgga
tggacgctgcagggtgaccgccacgccatggatggcgtcctcgatttcaacaacgcgtat
cgcaatgacggcatctcgggcgcgctcgacctcgcggccgacgcgaagacggacatccgt
ctcaccggacgcttcaacaactcgatgtaccaataccccaccggttcggccgggacgctc
gtcgatcgcaacgccgagcgcacggagaatcgcgtgctcgcggggctcgacgtggggcgc
cggtggaccgaccgcgtcgaaacgcgggcgcagtacacgtggatggacctcctgccgcgc
acgaacgacgggccggacaccccgggcgacacgctcggcttctatggcttcttcgcgcgc
ggggcggtgaagcgtcgcatggccgacgcgcgcaccacgctgcgcgtgggcgatgcgcag
ttcctcacgctgggcgccgagtgggctcgtgaccaggagcgcagcacctcggtgagtcag
tcgcagttcggcgatttcccggacacgctccgcgccgcgcgcgagaacagggccctctac
gcgcaagcgctcggcgagcggggacgcctcagctacacggttggcgcgcgactcgacgag
aactcggcattcggcagcttccgcaccgcgcgactcggggcgggctggcgcatcgcggac
gggctgcgcgtgcgcagctccgcggggacggcgttcaaggcgcccaacttcttcgagaac
ttcgcgggcggcttcacggtcgggaatcccgacctgcgtccggaggagtcgcgctcggcg
gacctcgggatcgacgcgacgctggcgacgggcgtgcgcctctcgatcaccggcttcgcg
cagcgcttcaagaacatgatccagtacaacggcgccgtgcccttcggctcgcccaactac
gagaacatcgtggcggcgaacgccggcggcgtcgaggccgaggtgaccttgccgagcgtc
ggcggcgtcgagacgcagatcggacacacgtggaccagcacgcgcgtcgcgcagtccggc
ttcgacaccaccgcgagcgcgaccttcgtgcggggcggcaagctgctccgtcggccggcc
aacgtgaccacgctgcaactgcgccgggcgctgggcacgcagggcaacgtgtcggccgtg
atcgtccgcaccggtgaacgcgaggaccgcgacttcgcgtcgttcccggctggtgtcgtc
gtgctcggcggcttcaccaccgttgaccttgccgccgacctgcggttgccgggccgcctc
ggcgagaccggccgcctcgtgctccgcgcggataatgtcaccgacgtgcagttcacgcag
atccagggcttccggagtccgggtcgcatcctctacgcgggacttagattggagcggtga
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