Pseudogemmatithrix spongiicola: Strain318_001336
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Entry
Strain318_001336 CDS
T10301
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Strain318_001336 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspc03400
]
Strain318_001336 (recO)
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Strain318_001336 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Strain318_001336 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
zf-FLZ
Motif
Other DBs
NCBI-ProteinID:
WKW14973
UniProt:
A0AA49K0H6
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All DBs
Position
1486563..1487306
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AA seq
247 aa
AA seq
DB search
MIETAAIVLHAFDYRETSRIVRLATRESGVVSAIAKGSRRPKSRFGQGLDLFTSGTALLV
LHPSRDLHTLAGFDASRARPALAGSLARFGAAAALAEICLRFGTEATAGVHDALAAGFDR
VAISADAEVAAATIAAAWRIVGELGFAPSLESCALCQRDLTVDEDVRFSHRSGGAVCSTC
RTLVPGARNLPAAARATLVAWMDNREIPLHDAQTAKAHQRLLREFLEEHLGDGRAFPAFQ
AWERLGS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgagaccgcggccatcgtcctccacgccttcgactaccgcgagacgagccggatc
gtacggctcgccacgcgggagtccggcgtggtctcggcgattgccaagggctcgcggcgc
cccaagagccggttcgggcaagggctcgaccttttcaccagcggcacggcgctgctcgtg
ctgcatcccagccgggatctgcacacgcttgccggcttcgacgcctcccgtgcgaggcca
gcgttggccgggtccctcgcgcgcttcggcgccgccgcggcgctggccgagatctgcctg
cgcttcggcaccgaagccaccgcgggcgtgcatgacgcgctcgcggcaggcttcgaccgc
gtcgccatcagtgcggacgccgaggtcgcggccgccacgattgccgctgcgtggcggatc
gttggggagcttggcttcgcgccctcgctcgagagctgcgcgctctgtcagcgcgactta
accgtcgacgaagatgtgcgcttctcccatcgcagcggcggcgcggtgtgctcgacctgt
cgcacgctcgtccccggcgcgcgcaacctccccgccgcggcgcgcgccacactggtcgcg
tggatggacaaccgggagattcccctacacgacgcgcagacggccaaggcgcaccagcgc
ttgctgcgtgaattcctcgaagagcacctcggcgatggccgtgccttcccggcattccag
gcctgggagcggctgggttcctga
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