Pseudogemmatithrix spongiicola: Strain318_001468
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Entry
Strain318_001468 CDS
T10301
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00541
Biosynthesis of various nucleotide sugars
pspc01100
Metabolic pathways
pspc01250
Biosynthesis of nucleotide sugars
Module
pspc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Strain318_001468 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pspc01005
]
Strain318_001468 (kdsA)
Enzymes [BR:
pspc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Strain318_001468 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pspc01005
]
Lipid A
Strain318_001468 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WKW15095
UniProt:
A0AA49K076
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All DBs
Position
complement(1621722..1622558)
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AA seq
278 aa
AA seq
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MEHRATFPRDRLFLIAGPCVIENDDILFRVADHLAKLAHHVPGGVIFKASFDKANRSNAG
AFRGPGMDEGLRALQRVRERTGLPVLTDVHLPEHCAAAAQAVDVLQIPAFLCRQTDLLEA
AGATGLAVNVKKGQFLHPEGMAGAVKKVLGANPPGLVRREGLCDVAVTERGSFFGYGDLV
VDMRNFARMRAATGVPVIFDGTHSVQQPGRGEGGASGGLREHIPALTYAACAAGADGLFL
ETHPDPDHAPSDGPNMLPLAQLDAVIRKAVAFWELARQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccgggcgaccttcccgcgcgaccggctgttcctgatcgccggtccctgcgtc
atcgagaacgacgacatcctgttccgggtcgccgaccatctggccaagctcgcgcaccat
gtgccgggcggcgtgatcttcaaagccagcttcgacaaggcgaaccgctccaacgccggc
gccttccgcgggccgggcatggacgaagggctgcgggccttgcagcgcgtgcgcgagcgg
acgggattgcccgtgctcaccgacgtgcacctgcccgagcactgtgccgcggcggcgcag
gcggtggacgtgctgcagatcccggcatttctctgccggcagaccgatctgctcgaggcc
gccggcgccacggggctcgccgtgaacgtcaagaaggggcagttcctgcaccccgaaggc
atggccggggcggtgaagaaggtcctcggcgcgaatcctcccgggctcgtgcggcgcgag
gggctttgcgacgtggcggtgacggagcgcgggtcgttcttcgggtacggcgacctcgtc
gtcgacatgcggaacttcgcgcggatgcgcgccgcgaccggtgtgcccgtaatcttcgac
ggcacgcactcggtgcagcagccggggcggggcgagggcggggccagcggcgggctgcgg
gagcacatcccagcgctcacgtatgcggcctgcgccgccggggccgatggtctcttcctc
gagacgcatccggatcccgaccacgcgcccagcgacggcccgaacatgctgccgttggcg
cagctcgacgcggtgattcgcaaggcggtggcgttctgggagctggcccgccaatga
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