Pseudogemmatithrix spongiicola: Strain318_001475
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Entry
Strain318_001475 CDS
T10301
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspc03036
]
Strain318_001475 (xerD)
Chromosome and associated proteins [BR:
pspc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Strain318_001475 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
WKW15102
UniProt:
A0AA49Q7I2
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All DBs
Position
complement(1630802..1631734)
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AA seq
310 aa
AA seq
DB search
MSRAGAPPISDELSRRFLLERFSEYLELELGSSPRTREAYLRDLSLLATWASTRHRVSGA
AALEAAHLREWVYEQKDQGRAATTIKRRISALRTWYRFLLAEGVVKADPSEKLESPRGWR
RLPDVLTVREVEQLIDAIPLEDAMAFRDRALLELAYGAGLRVSEWCTLEVKDVLLDELVV
RVFGKGGKERLVPIGRKAAGAVGMYLRELRPRLEKGKGEGRLFLNSRGRPLQRMTAWTIL
KKIIERSGVTKPVTPHTLRHSFATHLLEGGADLRAVQEMLGHADIATTQLYTHVNREHLR
QVHKQFHPRT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgccggcgccccgcccatctccgacgagctgtcccgccgcttcctgctcgag
cgcttcagcgagtacctcgagctggaactcggctcgagtccccgcacgcgcgaggcatac
ctgcgggacctctccctgctcgccacctgggccagcacgcggcatcgcgtgagcggagcg
gccgccctcgaggccgcgcacctgcgcgagtgggtctacgagcagaaggaccagggccgc
gcggcgacgaccatcaagcgtcgcatctccgcgctgcggacctggtatcggttcctgctg
gccgagggcgtggtgaaggcggatcccagcgagaagctggagagcccgcgcggctggcgg
cgcctgcccgacgtgctgacggtgcgcgaagtcgagcagttgatcgacgcgatcccgctg
gaggatgcgatggccttccgtgaccgcgcattgctggagctggcgtatggagccgggctg
cgcgtgagcgagtggtgcacgctggaggtgaaagacgtgctgctggacgagctcgtggtc
cgcgtcttcggcaagggcggcaaggagcggttggtgccgatcgggcgcaaggcggcgggg
gcggttgggatgtacctccgcgagctcaggccgcgcttggagaagggcaagggcgagggt
cgactctttctcaacagccgcggccggccgctgcagcgcatgacggcgtggaccatcctc
aagaagatcatcgaacgttctggcgtgacgaagccggtgactccgcatacgttgcggcat
tcattcgcgacgcatttgctggagggcggggcggacctgcgcgccgtgcaggagatgttg
gggcacgcggatattgcgacgacgcagttgtatacgcacgtgaatcgcgagcatttgcgg
caggtgcacaagcagtttcatccgcgcacctag
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