Pseudogemmatithrix spongiicola: Strain318_001519
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Entry
Strain318_001519 CDS
T10301
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00020
Citrate cycle (TCA cycle)
pspc00190
Oxidative phosphorylation
pspc00650
Butanoate metabolism
pspc00720
Other carbon fixation pathways
pspc01100
Metabolic pathways
pspc01110
Biosynthesis of secondary metabolites
pspc01120
Microbial metabolism in diverse environments
pspc01200
Carbon metabolism
Module
pspc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pspc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Strain318_001519
00650 Butanoate metabolism
Strain318_001519
09102 Energy metabolism
00190 Oxidative phosphorylation
Strain318_001519
00720 Other carbon fixation pathways
Strain318_001519
Enzymes [BR:
pspc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Strain318_001519
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
NAD_binding_8
Pyr_redox
GIDA
AlaDh_PNT_C
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WKW15145
UniProt:
A0AA49JZJ2
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Position
complement(1677011..1678933)
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AA seq
640 aa
AA seq
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MALKLDAKIPSGPLAEKWDKHRFEMKLVNPANKRKFSVIVVGSGLAGASAAATLSELGYN
VSCFCYQDSPRRAHSIAAQGGINAAKNYRNDGDSVQRLFYDTIKGGDFRAREANVYRLAQ
VSVDIIDQCVAQGVPFAREYGGLLANRSFGGAQVSRTFYARGQTGQQLLLGAYQALEKEI
ARGGVTMYERHEMLELVVVDGKARGIIVRDMVTGEIESHAADAVLLATGGYGNVFYLSTN
AKGCNVTATWRAHKKGAAFANPCFTQIHPTCIPVAGDHQSKLTLMSESLRNDGRVWVPKK
REDVGKNPWDIPEEDRDYYLERKYPSFGNLSPRDIASRAAKEACDDGRGVGPGGRGVYLD
FADAIKRLGAKAIEERYGNLFEMYQRITDEDPYKRPMRIYPAVHYTMGGLWVDYNLMSSI
PGLHVLGEANFSDHGANRLGASALMQGLADGYFVIPYTIGDYLASNKLDKVTTDHPAFRE
AKEQVEQRTKKLLSVKGTRTVDSFHRELGQIMWDKCGMARDAAGLKEALVRIPKLREEFW
QNVRVLGANEEINQSLEKAGRVADFLEFAELMCIDALHREESCGGHFRTEHQTEDGEAKR
NDAEFAYVAAWEYAGEGKAPILNKEPLEFENVHLSTRSYK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaagctcgacgccaagatccccagcggaccgctggccgagaagtgggacaag
caccgcttcgagatgaagctcgtgaaccccgccaacaagcggaagttcagcgtgatcgtc
gtgggctccggcttggccggcgcctcggcggccgccacgctcagcgagctcggctacaac
gtctcctgcttctgctaccaggactcgccgcgccgcgcgcactcgatcgccgcacagggc
ggcatcaatgccgccaagaactaccgcaacgacggcgattccgtgcagcggctgttctac
gacacgatcaagggcggtgacttccgcgcccgcgaggccaatgtgtaccgcctcgcgcag
gtgtcggtggacatcatcgaccagtgcgtggcgcagggcgtgccgttcgcgcgggagtac
ggcggattgctcgccaaccgctcgttcggcggcgcgcaggtctcgcgtacgttctacgcc
cgcggccagacgggccagcagctcttgctcggcgcctaccaggcgctggagaaggagatc
gccaggggcggcgtgacgatgtacgagcgccacgagatgctcgagctggtcgtcgtggac
ggcaaggcccgcggcatcatcgtgcgcgacatggtcaccggcgagatcgaatcgcacgcg
gccgatgccgtgctgctcgcgaccggcggctacggcaacgtcttctacctctcgacgaac
gccaagggctgcaacgtcacggcgacgtggcgcgcgcacaagaagggtgcggcgttcgcg
aatccctgcttcacgcagatccacccgacctgcatcccggtcgccggcgaccatcagtcg
aagctgacgctgatgtccgagtcgctgcgcaacgacgggcgcgtgtgggtgccgaagaag
cgcgaggacgtgggcaagaatccctgggacatccccgaggaagaccgcgactactacctc
gagcgcaagtatccgtcgttcggcaacctctcgccccgcgacatcgcctcgcgcgccgcg
aaggaagcctgcgacgacgggcgtggcgtgggcccgggcggccgcggcgtctacctcgac
ttcgccgacgccatcaagcgcctcggcgccaaggccatcgaggagcgctatggcaatctc
ttcgagatgtaccagcgcatcacggacgaggatccgtacaagcgtccgatgcgcatctac
ccggccgtgcactacacgatgggcggcctctgggtggactacaacctgatgagcagcatc
cccggcctgcacgtgcttggcgaagcgaacttctccgaccacggtgcgaaccgtctcggc
gcctcggcgctgatgcagggcctggccgacggctacttcgtgatcccgtacaccatcggc
gactacctcgcgagcaacaagctcgacaaggtgacgaccgaccacccggcattccgtgag
gccaaggagcaggtggagcagcgcacgaagaagctgctgagcgtgaagggcacgcgcacg
gtggactcgttccaccgtgagctcgggcagatcatgtgggacaagtgcggcatggcgcgc
gacgccgcggggctcaaggaggcgctggtgcgcatcccgaagctgcgcgaggagttctgg
cagaacgtgcgcgtgctcggtgcgaacgaggagatcaaccagtcgctggagaaggccggc
cgcgtagcggacttccttgagttcgccgagctcatgtgcatcgacgcgctgcatcgtgaa
gagagctgcggcgggcacttccgcacggagcaccagacggaagacggcgaagcgaagcgc
aacgacgcggagttcgcgtatgtggcggcttgggagtatgcgggggaggggaaggccccg
atcctgaacaaggagccgctcgagttcgagaacgtccacctgagcacgcggagctacaag
tga
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