Pseudogemmatithrix spongiicola: Strain318_001661
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Entry
Strain318_001661 CDS
T10301
Name
(GenBank) hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pspc Pseudogemmatithrix spongiicola
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspc03009
]
Strain318_001661
Enzymes [BR:
pspc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Strain318_001661
Ribosome biogenesis [BR:
pspc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Strain318_001661
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Enolase_like_N
MTS
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
BDI_0842
GNAT_like
N6_N4_Mtase
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
WKW15284
UniProt:
A0AA49JV18
LinkDB
All DBs
Position
complement(1825573..1826811)
Genome browser
AA seq
412 aa
AA seq
DB search
MTLTTLDIASISAGGDGVARHDGLVVFTPRTAPGDRVVAEVSVQGRVGRGRLVRVEREGS
VRIPARCAHYEAPDRCGGCQWQHVDIAAQRDAKRAMLRDAFQRIGKREIPLPAMHAGEPW
RYRRSLTLAMRKRASGEWYAGLRAFDDPEDVFELEDCLITAEPVLAGWREVMAAAVHLPD
EPRLRGTVRVIQDRPHFVLEGGKEWSELSAFLDAVPTLAAVWWQAEGKRRRLVADRRPAN
EPGASFAQVNPEMAEALHAVVVQRVMAHAPQRVIDAFSGAGDTAAAIAAQGVRVVAIEAD
EDATAYAATRLATRLANGSRAIAARVEDVLPAHLPADVVILNPPRSGVDAKVTAALLKSP
PKAIIYVSCDPATLARDVSRLPGWAVQHIECYDLFPQTAHVETLCELRPESP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctcaccacgctggacatcgcgagcatctcggcgggcggcgacggcgtcgcccgt
cacgacgggctcgtggtgttcacgccgcgcacggcgccgggcgaccgcgtggtcgccgag
gtcagcgtgcaggggcgcgtcggccgcggccggctcgtgcgggtcgagcgcgaaggcagc
gtgcggattcccgcgcgctgcgcgcactacgaggccccggatcgctgcgggggctgtcag
tggcagcacgtggacatcgcggcgcagcgcgatgcgaagcgcgcgatgctgcgcgatgcg
ttccagcggatcggcaagcgcgagatcccgctccccgcgatgcacgccggcgagccgtgg
cggtaccgccgctcgttgacgctggccatgcgcaagcgcgcgagcggcgagtggtacgcc
ggactccgcgccttcgacgatcccgaggacgtgttcgagctcgaggactgcctcatcacc
gctgagccggtgcttgccggctggcgcgaagtcatggctgcggcggtgcacttgcccgac
gaaccgcgactgcgtgggaccgtgcgtgtgatccaggaccggccgcacttcgtgctcgaa
ggcggcaaggagtggtcggaactctcggcgttcctcgacgcggtgccgacgctcgccgcc
gtgtggtggcaggcggaggggaagcgtcgtcgcctggtggcggaccgtcgcccggcgaac
gaacccggcgcgagcttcgcacaggtgaatccggagatggccgaggcgttgcatgcggtg
gtcgtgcagcgcgtgatggcgcatgcgccgcagcgcgtgatcgacgcgttcagcggcgcg
ggggataccgccgcggccatcgcggcgcagggcgtgcgggtggtggccatcgaggctgac
gaagacgcaacagcctacgcggcgacgcgcctcgcgacgcgcctcgcgaacggctcgcgc
gcgatcgccgcgcgcgttgaagacgtgctccccgcgcaccttcccgccgatgtggtgatc
ctcaatccgccccgcagcggcgtcgatgccaaggtgaccgccgcgctgctcaagtctccg
ccgaaggccatcatctacgtcagttgcgaccccgccaccttggcgcgcgatgtctcgcgc
ctccccggctgggctgtgcaacacatcgagtgctacgacctcttcccgcagaccgcgcac
gtcgagacgctgtgcgaactgcgcccggagtccccatga
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