Pseudogemmatithrix spongiicola: Strain318_001662
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Entry
Strain318_001662 CDS
T10301
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01959
pyruvate carboxylase subunit A [EC:
6.4.1.1
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00020
Citrate cycle (TCA cycle)
pspc00620
Pyruvate metabolism
pspc00720
Other carbon fixation pathways
pspc01100
Metabolic pathways
pspc01120
Microbial metabolism in diverse environments
pspc01200
Carbon metabolism
pspc01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Strain318_001662
00620 Pyruvate metabolism
Strain318_001662
09102 Energy metabolism
00720 Other carbon fixation pathways
Strain318_001662
Enzymes [BR:
pspc01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
Strain318_001662
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
GARS_A
ATPgrasp_ST
DUF3182
RimK
ATP-grasp_3
ATP-grasp_5
DUF3982
Motif
Other DBs
NCBI-ProteinID:
WKW15285
UniProt:
A0AA49Q8N6
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Position
complement(1826808..1828352)
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AA seq
514 aa
AA seq
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MKELRKVLIANRGEIAVRIIRACRELGIQSVAVYSDADAGAPHVRAADEAVHIGPAPASQ
SYLRGDHLIEVAKQVGADAIHPGYGFLSEREWFAKAVEDAGLIWIGPPASAIAAMGSKTA
ARTLAIKAGTPVVPGTTEALKDAAEAKKLAQEFGLPVLLKAAAGGGGKGMRVVRDLSEIE
GALGSAQREAKNAFGDDAVYIEKYIEGPRHVEIQVLADQHGNCISLGERECSIQRRHQKM
IEEAPSVAVSPELRAKMGAAAVAAAKAAGYVNAGTCEFLLDKHGNFYFLEMNTRIQVEHP
VTELVMGIDLVQWQLRIARGETLPFLETPKPNGWAIECRITSEDPANGFLPSTGRITHLQ
LPAGPGVRWDGGITTGSVVGLNYDPMLAKLIVHAPTRELAIARMERALRELVIHGVETSR
EFHLRMMADEDYRTSNVTIQWLEAKLPELLARKPSADTLRVAVIAGALFAQKDRAGRPGT
GVAGSAQTPSGAAPSDPSRASWAEQARREALRGA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaactgcgcaaggtcctcattgccaaccgcggcgagatcgcggtccgcatcatc
cgcgcctgccgcgaactgggcatccagagcgtcgcggtgtattcggacgcggacgccggt
gccccgcatgtgcgcgccgccgacgaggcggtgcacatcggcccggcgccggccagccag
agctatctccgcggcgatcacctgatcgaggtggccaagcaggtcggcgccgatgccatc
caccccggttacggattcctctccgagcgtgagtggttcgccaaggccgtcgaagacgcg
gggctgatctggatcggcccgccggcgtcggccatcgccgcgatgggttccaagacggcc
gcgcgtacgctggccatcaaggctggcacgccggtggtgccgggcaccaccgaggccttg
aaggacgccgccgaggcgaagaagctcgcccaggagttcggcctgccggtgctgctcaag
gccgcggccggtggcggcggcaagggcatgcgcgtcgtgcgcgatctcagcgagatcgaa
ggcgcgctcggctccgcccagcgcgaagctaagaacgccttcggcgacgacgccgtgtac
atcgagaagtacatcgaaggcccgcggcacgtcgagattcaggtgcttgcggaccaacac
ggcaactgcatctcgctgggggagcgtgagtgcagcatccaacgtcggcaccagaagatg
atcgaggaagcgccgtcggtggcggtctcaccggagctgcgcgcgaagatgggcgcggcc
gccgtcgccgccgcgaaggctgcgggctacgtgaacgccggcacctgcgagttcctgctc
gacaagcacgggaacttctacttcctcgagatgaacacccgcatccaggtcgagcatccc
gtcacggaactcgtgatgggcatcgacctcgtgcaatggcagctgcgcattgcgcgcggc
gagacgctgccgttccttgagacgcccaagcccaacggctgggccatcgagtgccgcatc
acgtcggaggatccggccaacggattcctgccgagcacggggcgcatcacgcacctgcag
ctgccggcggggccgggggtgcgctgggacggcggcatcaccacgggctccgtcgtcggg
ctcaactacgacccgatgctcgccaagctcatcgtgcacgcgccgacgcgcgagctggcg
atcgcgcgcatggaacgcgcgctgcgcgagctggtgatccacggcgtggagacctcgcgc
gagttccatctccgcatgatggccgatgaggactaccgtacgagcaacgtgacgatccag
tggctggaggcgaagctgcccgagctcctcgcgcgcaagccttcggcggacacgctgcgc
gtggcggtgatcgccggcgcgctgttcgcgcagaaggaccgtgcgggccggccgggaacg
ggtgtcgcgggctcggcgcagacgccatccggggccgcgccgtcggatccgtcgcgcgcg
agctgggctgagcaggcccgccgcgaggcgctgcgcggcgcgtga
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