Pseudogemmatithrix spongiicola: Strain318_001668
Help
Entry
Strain318_001668 CDS
T10301
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Strain318_001668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pspc03011
]
Strain318_001668
Ribosome [BR:
pspc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Strain318_001668
Bacteria
Strain318_001668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
WKW15291
UniProt:
A0AA49JUT0
LinkDB
All DBs
Position
complement(1834649..1836439)
Genome browser
AA seq
596 aa
AA seq
DB search
MTAVDTLTPEEIARQKRDAQRAQLRPLANRRPELYDEDEFSSDEFEAMMEMYNGTLASIE
EGEIVKSRVLEIRENLVVLDIGFKSEGTIPLEEFKDMPELKVGDEVEVLLEHLEDSEGSV
VLSKKKADFMRVWERIRVAYESDQPVTGTLVKKIKGGVVVDLMGVDAFLPGSQIALRRVP
NIDELLGQTYEFKIIKLNKRRRNIVVSRRVILETERAGKREKLMKELNKDQVRKGVVKNI
TDFGAFIDLGGVDGLLHITDMSWGRISHPSEMVQIGMELEVKVLDIDWERERISLGLKQL
QAYPWKDVAEKFPVGTRVSGKVVSITNYGAFIELEPGIEGLVHISEMSWTRNVRHPSKLV
SIGEAIEAVVLKVDSAEEKISLGMKQTEQDPWMVLPLKYPVGTRLNGKVRNLTSFGAFVE
IEPGIDGLIHISDMSWTKRVQHPSEVVKKGDAVDVVILNIDAENKRISLGLKQASEDPWL
RIGETFPVGTELPGKVARLMDKGVVVDIGNDIEGFVPLSHLNLTGQQVNSSADVAWEGMA
MNVRILEVDPIHRRIVLGVVDIPAGQERPAEPSKVHTEDEDNVPIPADLDAVADEE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagtcgatacgctgacccctgaggaaatcgcgcgccagaagcgcgacgcccag
cgcgcgcagctccgccccctcgccaaccgccgccccgagctctacgacgaggatgaattc
tcgtccgacgagttcgaagcgatgatggagatgtacaacgggacgctcgcctcgatcgaa
gaaggcgagatcgtcaagtcccgtgtgctcgagatccgcgagaacctcgtcgtgctcgac
atcggcttcaagtccgagggcacgatcccgctcgaagagttcaaggacatgccggagctc
aaggtcggggacgaagtcgaagtcctccttgagcacctcgaggattccgagggctccgtc
gtcctgtcgaagaagaaggccgacttcatgcgcgtgtgggagcggatccgcgtcgcgtac
gagtccgaccagccggtcaccggcacgctcgtcaagaagatcaagggtggcgtggtcgtc
gacctcatgggcgtcgacgcgttcctcccgggttcgcagatcgcgctccgtcgcgtcccg
aacatcgacgagctcctcggccagacctacgagttcaagatcatcaagctcaacaagcgt
cgccgcaacatcgtcgtgtctcgccgcgtgatcctcgagaccgagcgggccggcaagcgc
gagaagttgatgaaggagctcaacaaggatcaggtgcggaagggcgtggtcaagaacatc
acggacttcggcgccttcatcgacctcggcggcgtggacggcctgctccacatcaccgac
atgtcgtggggccgcatctcgcatccgagcgagatggtccagatcggcatggagctcgag
gtcaaggtcctggacatcgattgggagcgcgagcgcatctcgctcggcctcaagcagctc
caggcctacccgtggaaggatgtcgccgagaagttcccggtcggcacccgcgtctcgggc
aaggtcgtcagcatcacgaactacggcgccttcatcgagctcgagccgggcatcgaaggc
ctcgtgcacatctctgagatgagctggacgcgcaacgtccgccatccctcgaagctcgtc
tcgatcggcgaggccatcgaggcggtggtgctcaaggtcgattcagccgaagagaagatc
tcgctcggcatgaagcagaccgagcaggatccgtggatggtgctgccgctcaagtacccg
gtcggcacgcgcctcaacggcaaggtccgcaacctgacctcgttcggcgccttcgtcgag
atcgagccgggcatcgacggcctcatccacatctccgatatgtcttggacgaagcgtgtc
cagcacccgtcggaagtcgtgaagaagggcgacgcggtggacgtggtcatcctcaacatc
gacgccgagaacaagcgcatctcgctcggcctcaagcaggcgtccgaggatccgtggctg
cgcatcggtgagaccttcccggtcggcaccgagctcccgggcaaggtcgcccgcctgatg
gacaagggcgtcgtcgtcgacatcggcaacgacatcgaaggcttcgtgccgctctcgcac
ctcaacctcaccggccagcaggtcaacagctctgctgacgtggcgtgggaagggatggcg
atgaatgtgcggatcctcgaggtcgatccgatccaccgtcgcatcgtgctcggcgtggtg
gacatcccggcgggccaggagcggccggcggagccgtccaaggtgcatacggaagatgag
gataacgttccgattccggcggaccttgatgccgtggcagacgaggagtaa
DBGET
integrated database retrieval system
