Pseudogemmatithrix spongiicola: Strain318_001690
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Entry
Strain318_001690 CDS
T10301
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Strain318_001690 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspc03400
]
Strain318_001690 (xseB)
Enzymes [BR:
pspc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Strain318_001690 (xseB)
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Strain318_001690 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Dynamitin
Motif
Other DBs
NCBI-ProteinID:
WKW15310
UniProt:
A0AA49JZW5
LinkDB
All DBs
Position
complement(1856950..1857162)
Genome browser
AA seq
70 aa
AA seq
DB search
MSGMNFEQSLARLEQIAGALDRDDLPLEDALKLFEEGITRLREASAALADAEGKVRTLLE
QADGVFGTKA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtatgaacttcgaacaatccctggcgcgcctcgaacagatcgcgggcgcgctc
gatcgcgatgacttgccactcgaagacgcgttgaagctcttcgaggaaggcatcacgcgc
ctgcgcgaggcctcggcggcgcttgccgacgccgagggcaaggtgcgcacgctgctcgag
caggcggacggcgtgttcgggaccaaggcatga
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