Pseudogemmatithrix spongiicola: Strain318_001818
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Entry
Strain318_001818 CDS
T10301
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00523
Polyketide sugar unit biosynthesis
pspc01110
Biosynthesis of secondary metabolites
pspc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Strain318_001818
Enzymes [BR:
pspc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
Strain318_001818
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
KR
NmrA
adh_short
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WKW15433
UniProt:
A0AA49Q778
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Position
complement(1993565..1994719)
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AA seq
384 aa
AA seq
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MRVLVTGGAGFIGARLSRHLVSRGHAVRVLDNLSPQIHGPDALTRPGPLQQLRAEVELVV
GSVTDPEVWRQAIAGQDAVVHLAAETGTGQSMYESDRYVQVNVSGTALMLDALGTLRNSV
SKVVVSSSRAVIGEGAYRDGAGRIVFPPSRRDRDLSQGRFGLYCETTGEELESVPTDESA
PFQPTSVYGITKQAQEQLVTTGCAALGRAFVALRYQNVYGPGQSLSNPYTGLLSIFSTRL
LSGRGIEVFEDGEESRDFVFIDDVVAATTAALERDAANNHVIGIGSGTRTSVLQAARGLA
AALGCEPELRISGRYRLGDIRHNCADLSRARQALGYVPTVTFEEGLRRFVAWVREQGPGS
DGYERSLEELGARGMLRGARAHHE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcctggtcactgggggcgctggattcatcggcgcgcgattgtcgcggcacctc
gtcagccgcggacacgcggtgcgagtcctcgataatctgtccccgcagatccacgggcca
gacgcactgacgcgccccggaccgctgcagcaactgcgcgccgaggtggaactggtggtc
gggtcggtcaccgatcccgaggtttggcggcaggcgattgcggggcaggacgccgtcgtc
cacctggcggccgagacaggtaccgggcagtcgatgtacgagagcgaccgctacgtgcag
gtcaatgtcagcggaaccgccctgatgttggacgcactcgggacgctgcggaactcggtc
tcgaaagtcgtcgtctcgtcgtcccgcgccgtcatcggggaaggcgcctatcgcgacggt
gccggtcgcatcgtgttcccgcccagccggcgggaccgcgacctctcccaaggccgcttc
ggattgtactgcgagacaactggcgaggagcttgagtccgtgccgacggacgagtcggcg
ccgtttcagcctacatcggtgtacggcatcacgaagcaagcgcaggagcagctggtgacg
acgggttgcgcggcgctcgggcgcgcgttcgtcgcgctgaggtaccaaaacgtctacggc
ccgggccaatcgctctccaacccgtacacgggattgctctcgatcttctcgacgcgcctg
ctctccgggcgcggcatcgaagtgttcgaggacggcgaggagagtcgtgacttcgtgttc
atcgacgatgttgtcgcggcgacaaccgcagccctcgagcgcgacgcggcgaacaaccat
gttatcgggatcggctccggaacgcgcaccagcgtcttgcaggccgcacgcgggctcgcg
gcggcgctggggtgtgagcctgagctgcgcatctccggccggtaccgcttgggcgacatc
cgccacaactgcgcggacctgagccgcgcacgccaggcgctcggctacgtcccgacggtg
acgttcgaggagggtttgcggcgcttcgtcgcatgggtacgggagcaggggcccggctcc
gatggctacgagcgaagcctcgaggagctcggggctcgcggaatgctgcggggcgcccgc
gcgcaccatgagtga
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