Pseudogemmatithrix spongiicola: Strain318_001829
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Entry
Strain318_001829 CDS
T10301
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00521
Streptomycin biosynthesis
pspc00523
Polyketide sugar unit biosynthesis
pspc00525
Acarbose and validamycin biosynthesis
pspc00541
Biosynthesis of various nucleotide sugars
pspc01100
Metabolic pathways
pspc01110
Biosynthesis of secondary metabolites
pspc01250
Biosynthesis of nucleotide sugars
Module
pspc_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Strain318_001829
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Strain318_001829
01055 Biosynthesis of vancomycin group antibiotics
Strain318_001829
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Strain318_001829
00525 Acarbose and validamycin biosynthesis
Strain318_001829
Enzymes [BR:
pspc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Strain318_001829
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
WKW15444
UniProt:
A0AA49Q549
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All DBs
Position
complement(2007150..2008106)
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AA seq
318 aa
AA seq
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MRVLITGAAGFLGSHLCDRFLAEGHEVVGLDNFLTGHADNIAHLFGHERFKFLRHNISEF
TYVAGPLDGVLHFASPASPVDYLEMPIQTLKVGSLGTHNALGIALAKGARFLLASTSEVY
GDPLVHPQPESYWGNVNPVGPRGCYDEAKRFAEAMTMAYHRAQGVDTRIVRIFNTYGPRM
RPHDGRVVSNFIVQALQGAPLTVYGDGSQTRSFCYAEDEVEGIYRLFNSSETMPVNIGNP
NEFTVRQLAELVLELTGSTSEIVSHPLPADDPKVRQPDITRAKSILGWEPRVQLREGLAR
TIEYFRGLKGTPRLQPPT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgctcatcaccggcgctgcagggtttctcgggtcgcacctctgcgaccgtttt
ctcgccgaggggcatgaggttgtcggattggacaacttcctcacgggacacgccgacaac
atcgcccacctgttcggccacgaacgcttcaagttcctccgccacaacatctccgagttc
acgtacgtcgcgggtccgctcgacggcgtgctgcacttcgcctcgccggccagcccggtg
gactatctcgagatgccgattcagaccctcaaggtcggctccctcggcacccataatgcg
ctgggcatcgccctcgcgaagggcgcgcggttcctgttggcgagcaccagcgaagtgtac
ggggaccccctcgtgcatccgcagcccgaatcctattggggcaatgtcaaccccgtgggg
ccaagaggctgctacgacgaggccaagcgcttcgccgaggccatgaccatggcctaccac
cgtgcgcagggcgtggacacgcgcatcgtccgcatcttcaacacctacggcccgcgcatg
cggccgcacgacggtcgcgtggtctcgaacttcatcgtgcaggcgctgcagggcgcgcca
ctgacggtctacggcgacggatcgcagacgcgatcgttctgttatgccgaagacgaggtc
gagggtatttacaggctgttcaactcgtccgagacgatgcccgtgaacatcggcaatccg
aacgagttcaccgtccgccagctggctgaacttgtgctcgagctgacgggtagcacgagt
gagatcgtctcgcacccgctcccggccgacgaccccaaggtcaggcagccggacatcacc
cgcgccaagagcatccttggctgggaaccgcgtgtccaactccgtgagggtttggcgcgt
accattgagtacttccgcggcttgaagggcacgccgcggctgcaaccaccgacctaa
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