Pseudogemmatithrix spongiicola: Strain318_001835
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Entry
Strain318_001835 CDS
T10301
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00220
Arginine biosynthesis
pspc00240
Pyrimidine metabolism
pspc00250
Alanine, aspartate and glutamate metabolism
pspc01100
Metabolic pathways
pspc01110
Biosynthesis of secondary metabolites
pspc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Strain318_001835 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Strain318_001835 (carB)
00220 Arginine biosynthesis
Strain318_001835 (carB)
Enzymes [BR:
pspc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Strain318_001835 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WKW15450
UniProt:
A0AA49JVT3
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All DBs
Position
complement(2013602..2016841)
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AA seq
1079 aa
AA seq
DB search
MPRRNDIHRILLIGSGPIVIGQGAEFDYSGTQAAKALREEGYEVILVNSNPATIMTDPEV
ADRTYIEPVTPEYVELIIEREKPDALLPTMGGQTALNVAMALHERGVLEKHGVELIGANA
RAIAVAEDRKLFAEAMAEIGLKCPEGKIATTWEEALEIAEWTGFPAIIRPAFTLGGSGGG
IAYNRDEYERIVRRGLDESPISQVLIERSLLGWKEYELEVMRDAQDNVVIICSIENLDPM
GIHTGDSITCAPAMTLSDREYQVMRDAAMKVIRKIGVAAGGCNIQFAVNPANGEMVVIEM
NPRVSRSSALASKATGFAIARIGTKLAVGYSLDEIPNDITKTTPASFEPVLDYVVVKVPR
FAFEKFPGANTTLTTQMKSVGESMAMGRTFKEAFQKALRALETGRAGWVVGERPVDDRVA
DDSIDAVRAALPVPVPERMFQIKRAMLLGMSLEEIRQRTMMDPWFLEQFAEMLEAEKAYA
AAPTVDARLVRRMKRMGFSDRQLAALRKETEQQARERRWALGVRPAYKMVDTCAGEFPSN
TPYLYSSYDEESEAPRTGKKSVIILGSGPNRIGQGVEFDYCCVRAALALREAGYETIMVN
SNPETVSTDYDTSDKLYFEPLTFEDVLEIVDREQPVGVIVQLGGQTPLKLVKPLEAAGVK
ILGTSPEAIDIAEDRKRFEQLARELGVQQPPNGTATSVEEAVKIAERIGYPVLLRPSYVL
GGRAMEIVYDEPSLRDYFQRAVRVSEDRPVLVDAFLEDAFEADVDALSDGETVVIGGVME
HIEDAGIHSGDSACALPPYLISQEHQDQMRAHTVAFAKALGVVGLINVQYALKDGVVYVL
EVNPRASRTVPFVSKTIGKPLASLAARVMLGETLEQLGYTEEIVAPFVSVKEAVFPFTKF
REFDPILGPEMRSTGEVMGVSETFGMAYAKAEISAGNPLPREGTVMLTVNDRDKAKASKI
AARFATLGFGLVATEGTAKHLAGRGIEARSVFKVSGGRPNGIDLMVNGELQLLINTPLGK
RAQKDDYSLRQAAVANRVPYTTTLSGASAACEAIETMRTTKAAVKSLQEWQAMVGVEPA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgtaacgatatccatcgcattctcctcatcggctccggcccgatcgtcatc
gggcagggcgctgagttcgactactccggtacgcaagcggcgaaggcgctgcgcgaagag
ggctacgaggtcatcctcgtgaactcgaacccggcgacgatcatgactgacccggaagtc
gccgaccgcacgtacatcgagccggtgacgccggagtacgtggagctgatcatcgagcgc
gagaagcccgacgcgctgctgcccaccatgggcggccagacggccctcaacgtggcgatg
gccctgcatgagcgcggcgtgctcgagaagcacggcgtggagctgatcggcgcgaacgcg
cgggcgatcgccgtggccgaggaccgcaagctgttcgccgaggcgatggccgagatcggg
ctcaagtgcccggaaggcaagatcgcgacgacctgggaagaggcgctggagatcgccgag
tggacgggcttcccggcgatcatccggccggcgttcacgctcggcggctcgggcggcggc
atcgcgtacaaccgcgacgagtacgaacgcatcgtgcgccgcgggctcgacgaatcgccg
atctcccaggtgctgatcgagcgctcgctgctgggctggaaggagtacgagctcgaggtg
atgcgcgacgcgcaggacaacgtcgtgatcatctgctcgatcgagaacctcgatccgatg
ggcatccacacgggtgactccatcacctgcgcgccggcgatgacgctgtcggaccgtgag
tatcaggtgatgcgcgacgcggcgatgaaggtgatccgcaagatcggcgtggcggctggt
ggctgcaacatccagttcgcggtgaacccggcgaacggcgagatggtcgtcatcgagatg
aacccccgcgtgtcgcggtcctcggcgctggcgtcgaaggcgacgggcttcgcgatcgcg
cgcatcggcacgaagctggcggtgggctactcgctcgacgagatcccgaacgacatcacg
aagacgacgccggcaagcttcgagccggtcctcgactacgtggtcgtgaaggtgccgcgc
tttgccttcgagaagttccccggcgcgaacaccacgctcacgacgcagatgaagtcggtg
ggcgagtcgatggcgatggggcgtacgttcaaggaggccttccagaaggccctgcgcgcc
ctcgagacggggcgtgccggctgggtggtgggcgagcggccggtggacgaccgcgtggcg
gacgattcgatcgacgccgtgcgcgccgcgctcccggtgccggtgccggagcgcatgttc
cagatcaagcgcgcgatgctcctcggcatgagcctcgaggagatccgccagcgcacgatg
atggatccgtggttcctcgagcagttcgccgagatgctcgaggccgagaaggcgtatgcc
gcggccccgacggtggacgcgcgtctcgtgcgccgcatgaagcgcatgggcttcagcgac
cgccagctggccgcgctgcgcaaggagaccgagcagcaggcgcgtgagcgccgctgggcg
cttggcgtgcgcccggcgtacaagatggtcgacacctgcgccggcgagttcccgtcgaac
acgccgtacctgtattcctcctacgacgaggagagcgaggcgccgcgcacgggcaagaag
agcgtgatcatcctcggctccgggccgaatcgcatcggccagggcgtggagttcgactat
tgctgcgtgcgcgcggcgctcgcgctacgcgaggccgggtacgagacgatcatggtgaac
tcgaaccccgagaccgtctcgaccgactacgacacctccgacaagctgtacttcgagccg
ctgaccttcgaggacgtgctggagatcgtcgaccgcgagcagccggtgggcgtgatcgtg
cagctcggcggccagacgccgctgaagctggtgaagcccttggaggccgcgggcgtgaag
atcctcggcacctcacccgaggcgatcgacatcgccgaggaccgtaagcgcttcgagcag
ctggcccgcgagctgggtgtgcagcagccgccgaacggcacggcgaccagcgtcgaggag
gcagtgaagatcgccgagcgcatcgggtacccggtgctgctgcggcccagctacgtgttg
ggcgggcgtgcgatggagatcgtctatgacgagccgtcgctgcgtgattacttccagcgc
gcggtgcgcgtgagcgaggatcgcccggtgcttgtcgacgcgttcctcgaggacgcgttc
gaggcagacgtggacgcgttgtcagacggcgagacggtggtgattggcggcgtgatggag
cacatcgaggacgccggcatccactccggcgactcggcctgcgcgctgccgccgtacttg
atctcgcaggagcatcaggaccagatgcgggcgcacaccgttgcgttcgccaaggccctc
ggcgtcgtcggcttgatcaacgtgcagtacgcgctcaaggatggcgtcgtctacgtgctc
gaggtcaatccccgtgcctcgcgcaccgtgccgtttgtgtcgaagaccatcggcaagccg
ttggcgtcgttggcggcgcgagtcatgctcggggagacgctggagcaactggggtacacg
gaggagatcgtcgcgccgttcgtcagcgtgaaggaagcggtgttcccgttcacgaagttc
cgtgagttcgacccgatcctcggccccgagatgcggtccacgggcgaggtgatgggtgtg
agcgagaccttcgggatggcctatgccaaggccgagatctccgccggcaacccactgccg
cgcgagggcacggtgatgttgaccgtgaacgaccgcgacaaggcgaaggcgagcaagatc
gccgcccggttcgcgacgctcggcttcggtctcgtggcgacggagggcacggccaagcat
ctcgcggggcgggggatcgaggcgcgcagcgtgttcaaggtgagcggcgggcggcccaac
ggcatcgacctgatggtgaacggcgagctgcagctgctgatcaacacgccgctgggcaag
cgggcgcagaaggacgactattcgctgcggcaggcggcggtggcgaaccgcgtgccgtac
acgacgacgctgtcgggggcgagcgcggcctgtgaggcgatcgagacgatgcggacgacg
aaggcggcggtgaagagcttgcaggagtggcaggcgatggtcggggtggagcccgcgtga
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