Pseudogemmatithrix spongiicola: Strain318_001837
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Entry
Strain318_001837 CDS
T10301
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00051
Fructose and mannose metabolism
pspc00541
Biosynthesis of various nucleotide sugars
pspc01100
Metabolic pathways
pspc01250
Biosynthesis of nucleotide sugars
Module
pspc_M01018
GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
Strain318_001837 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Strain318_001837 (gmd)
Enzymes [BR:
pspc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
Strain318_001837 (gmd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
NAD_binding_10
adh_short
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
WKW15452
UniProt:
A0AA49JV94
LinkDB
All DBs
Position
complement(2017784..2018758)
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AA seq
324 aa
AA seq
DB search
MRTALITGITGQDGSYLAELLLAKGYRVVGIVRRSSTTPYERIAHLVDKVELVSADLLDQ
TSLMDAMAEVKPDEIYNLAAQSFVATSWTQPVLTGEFTATGVTRMLEAMRRTVPRSRFYQ
ASSSEMFGLVQETPQRESTPFYPRSPYGVAKLYGHWITVNYRESFGLYAVSGILFNHESP
RRGLEFVTRKITDGVARIKLGRATELRLGNLEARRDWGFAGDYVDAMWRMLQQETPGDYV
IGTGETFSVRQFLEEAFGHVDLDWREFVKQDERFMRPAEVDLLVSDPAKAARELGWRPTV
PFKGLVQMMVDADLARHRAAKGVG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtaccgcgctaatcaccggcatcacgggtcaggacggttcctacctcgccgagctg
ctgctcgcgaagggctaccgcgtcgtcggcatcgtccggcgctcctccaccactccttac
gagcgcatcgcgcatctcgtggacaaggtagagctggtctcggcggacctgctcgaccag
acctcgttgatggatgcgatggccgaggtgaagcctgacgagatctacaatctcgcggcg
caatccttcgtggccacatcgtggacccagccggtcctcacgggtgagttcaccgcaacg
ggcgtcacccgcatgctcgaagccatgcggcgcacggtgccgaggtctcggttttatcag
gcgtcgagctcggagatgttcgggctcgtacaggagacgccgcagcgggagtccacgccg
ttctatccgcgctcgccgtacggtgtcgcgaagctctatggccattggatcacggtcaac
taccgcgagtcgttcgggctctacgccgtcagtggcatcctcttcaaccacgagtctccg
agacgcggcttggagttcgtgacgcggaagatcacggacggtgtggcgcgcatcaagctt
ggccgcgccaccgaactgcgcctcggcaacctcgaagcgcggcgcgactggggcttcgcc
ggcgactacgtggacgcgatgtggcgcatgttgcagcaggagaccccgggtgactacgtg
atcgggacgggtgagacgttctcggtgcggcagttcctcgaggaggcttttggccacgtg
gatctggactggcgcgagttcgtgaagcaggacgagcgcttcatgcgacctgcggaggtg
gacctgctcgtctcggaccccgccaaggcagcacgagagctcgggtggcgcccgacggtg
ccgttcaagggcctggtgcagatgatggtcgatgccgacctcgcgcggcatcgtgccgcc
aagggcgtcggctga
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