Pseudogemmatithrix spongiicola: Strain318_002030
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Entry
Strain318_002030 CDS
T10301
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Strain318_002030 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Strain318_002030 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WKW15631
UniProt:
A0AA49K0V9
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Position
2231820..2234627
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AA seq
935 aa
AA seq
DB search
MKDRIIVRGARQHNLRDVSVDFPRRAITVVTGPSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLERMPKPDVDSIDGLSPSVAIEQKNPTRTSRSTVGTATEITDYLRLLWARAGHTL
CPHCGRELKPDSAESACDAVLAWPAGTRLMVAFPFARSAKLTHARILEHLRAKGFVRVAA
DGIVLHLDEITGSKPNLAKVKELLVVTDRLSVGTEQRTRLTDALETAFREGDGDAVVIPV
SEPIALAPLRFTTAFRCPNDGHVAPPPSPQLFSFNNPRGACETCNGFGATLEYDEALIVP
YPERTLAQGALDPWTKPRYENKRRALAEFAKANGIPMDVAWRDLASAQREKLLRGKAKGY
VGMFPFLEALEPKKYKQYIRVFLRQYQTAQTCTSCQGARLKPDALHVKVAGKTIAEVQAM
PVGLLRAWIDTLALSPQETAIAAHILREARDRIAFLCDVGLTYLALDRATRTLSGGEAQR
IGLANSLGARLVDTLYVLDEPSIGLHPRDLGRLLDLLKRLRDTGNTVLMVEHDLEAIRLS
DWMLELGPASGEKGGQVVFSGPTVNAADSPLTGQFLTGARTIAVPAKRRRVGPQWLTLSG
AREHNLREVAVKIPLGALTCVTGVSGSGKSTLVHDVLFRALERQLTGEHTARQHLGERVG
AFDSLDGWQALDEVVLVDQEPIGKSPRSNPVTYVKAFDEIRRIFAEVPLARQRRYSAGTF
SFNVAGGRCETCEGAGALEVEMVFMADVFVPCETCGGTRYKPEVLEVTYFGKRITDVLDM
TVDEAIRFFPREEKLGQALWQIQQVGLGYLRLGQPATTLSGGESQRLKIARELALAAKKG
GRKCYILDEPTTGLHPRDVEVLCDVLDRLVDNGHTVIVIEHDMDVVKRADWIIDMGPDGG
DGGGRVVAMGRPEDIVTVAASHTGRFLAPELTAKP
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaccgcatcatcgtccgcggcgcgcgccagcacaacctgcgcgacgtctcggtc
gacttcccccgccgcgccatcaccgtcgtcaccggaccctcaggctccgggaagtcctcg
ctcgcgttcgacaccatctacgccgagggccagcggcgctacgtcgagtccctgtccgcc
tacgcgcggcagtttctcgagcgcatgcccaagccggatgtcgattccatcgacggcctc
tcgccgtcggtggccatcgaacagaagaacccgacgcgcacctcgcgctcgacggtcggc
acggccaccgagatcaccgactacctgcggctgctctgggcccgcgccggacacacgctg
tgcccgcactgcggacgcgagctcaagccggattccgcggagtccgcctgcgacgccgtc
ctcgcctggccggcaggcacgcgcctcatggtcgcctttccgttcgcgcgctcggccaag
ctcacgcacgcacgcatcctcgagcatctgcgcgcaaagggcttcgtgcgcgtcgccgcg
gatggaatcgtgctgcacctcgacgagatcacgggcagcaagccgaacctcgcgaaggtg
aaggagctgctcgtggtcacggaccgcctgtcggtcggcacggagcagcgcacgcgcctg
accgacgcgctcgagacggcgttccgcgagggggacggcgacgctgtcgtgattccggtg
tccgagccgatcgcactcgcgccgctacgcttcacgaccgcgtttcgctgcccgaacgac
gggcacgtcgcgccgccgccctcgccccagctcttctcgttcaacaacccgcgcggcgcc
tgcgagacctgcaacggcttcggcgccaccctggagtacgacgaagcgctcatcgtcccg
taccccgagcgcacgctcgcccaaggcgcgctcgatccgtggaccaagccgcgctacgag
aacaagcgccgcgcgctggcggagttcgccaaggcgaatggcatccccatggatgtcgcc
tggcgcgacctcgcatcggcgcagcgcgaaaagctgctgcgcggcaaggccaagggctac
gtcgggatgttccccttcctcgaagccctcgagccgaagaagtacaagcagtacatccgc
gtgttcctgcggcagtaccagaccgcgcagacctgcacgagttgccagggcgcacggctc
aagcccgacgcgctgcacgtgaaggtcgcgggcaagaccatcgccgaggtgcaggccatg
cccgtcggcttgctgcgcgcgtggatcgacactctcgcgctctcgccgcaggagacggcc
atcgcggcgcacatcctgcgcgaggcccgcgatcgcatcgccttcctctgcgatgtcggg
ctcacgtatctcgcgctggaccgcgccacgcgcacgctctcgggcggcgaagcccaacgc
atcggcctcgccaactcgctcggcgcgcgcctcgtcgacacgctctacgtgctcgacgaa
cccagcatcggcctccacccgcgcgacctcgggcgcctgctcgacttgctgaagcgcctg
cgcgacacgggcaacaccgtgctcatggtcgagcacgacctcgaagccatccgcctgagc
gactggatgctcgaactcggccccgccagcggcgagaagggcggacaagtcgtgttcagc
ggcccgacggtgaacgcggccgacagtccgctcaccggacagttcctcaccggcgcccgc
acgatcgccgtgcccgccaagcgccgtcgcgtcggaccgcagtggctcaccctcagcggc
gcgcgcgagcacaacctgcgcgaggtcgccgtgaagatcccgctcggcgcgctcacttgc
gtcaccggcgtgagcggcagcggcaagagcacgctcgtgcacgacgtgctcttccgcgcc
ctcgagcgccagctcaccggcgagcacacggcgcgccagcacctcggcgaacgcgtcggc
gccttcgacagcctcgacggttggcaggcgctcgacgaggtcgtcctcgtggatcaggag
ccgatcggcaagtcgccgcggtcgaatcccgtgacctacgtgaaggccttcgacgagatc
cggcgcatcttcgccgaggtgccgctcgcgcggcagcgccgctacagcgcgggcaccttc
tcgttcaacgtggccggcgggcgctgcgagacctgcgagggcgccggcgcgctcgaggtc
gagatggtcttcatggccgatgtcttcgtgccctgcgagacctgcggcggcacgcgctac
aagcccgaggtgctcgaagtgacgtacttcggcaagcgcatcaccgatgtgctcgacatg
accgtggacgaggcgatccgcttcttcccgcgcgaggagaagctcggccaggcgctgtgg
cagatccagcaggtgggcttgggctacctccgcctcggtcaacccgcgaccaccctgtcc
ggcggcgaatcgcagcggctcaagatcgcgcgcgaactcgcgctcgccgcgaagaagggc
ggccgcaagtgctacatcctcgacgagcccacgacgggcctgcatccgcgggatgtcgaa
gtgctctgcgacgtgctcgaccggctcgtggacaacgggcacaccgtcatcgtgatcgag
cacgacatggacgtcgtcaagcgcgcggactggatcatcgatatggggccggacggcggc
gacggtggcggccgggtcgtcgcgatggggcggccggaagacatcgtaaccgtcgcggcg
tcgcacacggggcgattcctcgccccggagctcaccgccaagccctga
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