Pseudogemmatithrix spongiicola: Strain318_002088
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Entry
Strain318_002088 CDS
T10301
Name
(GenBank) phytoene/squalene synthase family protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00906
Carotenoid biosynthesis
pspc01100
Metabolic pathways
pspc01110
Biosynthesis of secondary metabolites
Module
pspc_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Strain318_002088
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pspc01006
]
Strain318_002088
Enzymes [BR:
pspc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Strain318_002088
Prenyltransferases [BR:
pspc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Strain318_002088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
WKW15686
UniProt:
A0AA49Q8D6
LinkDB
All DBs
Position
2295538..2296533
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AA seq
331 aa
AA seq
DB search
MVLPGFLREDDAALAKSDAQHCESITRAHARTFALASGFLPPRKRRGAFAVYAFCRLADD
IVDRNRGKDPQHLQAELDAYRAGVAEAINGNPDGPVFRELWRCVSEYGVPADVLEELLNG
VARDVQPQRYATWAELSLYCEGVAASVGAMCTYIFGVSGDESVRERAIKYARTLGVAMQV
TNILRDVGEDARIDRCYLPDDVLAAFGLSAERVLHDPTIKDDPKWVAMMRHEVARARALY
RAASPGIALLEPDAQRCARACADGYEAILGAIEANGYDSITTRARVGNWARAGLLWTIWR
SGAEVPPAEAEGPVIEWGARQLSRPEEMVLG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggtgctccccggcttcctccgggaggacgacgccgcgctggcgaagagcgacgcccag
cactgcgagtcgatcacgcgcgcgcatgcccgcaccttcgcgctggcgagcggcttcctg
ccgccgcggaagcggcgcggggccttcgcggtgtacgcgttctgccgcctggccgacgac
atcgtcgaccgcaatcgcggcaaggatccgcagcacctgcaggccgagctcgatgcgtat
cgcgcgggcgtggcggaggccatcaacggcaatcccgacggcccggtgttccgcgagctc
tggcgctgcgtcagcgaatacggcgtgccggcggacgtgctcgaggagctgctcaacggc
gtcgcgcgcgacgtgcagccgcagcgctacgcgacctgggcggaactctcgctgtactgc
gaaggcgtcgcggcctccgtcggcgcgatgtgcacctacatcttcggcgtcagcggcgac
gaatccgtgcgcgagcgcgccatcaagtacgcgcgcaccctcggcgtggccatgcaggtg
acgaacatcctgcgcgacgtcggcgaggacgcgcgcatcgaccgctgctacctgccggac
gacgtgctcgccgccttcggcctgagcgcggagcgcgtgctgcacgacccgacgatcaag
gacgatccgaagtgggtggcgatgatgcgccacgaggtcgcgcgcgcgcgcgccttgtac
cgtgcggcatcgccgggcatcgcgctgctcgaacccgatgcgcagcgctgcgcgcgggcc
tgcgccgatggctacgaggcgatcctcggggccatcgaggcgaacggctacgactccatc
acgacgcgggcgcgtgtggggaactgggcgcgtgccgggctgctttggactatctggcgc
tcgggcgcggaagtaccgcccgccgaggcggaaggaccggtgattgaatggggcgcgcga
cagctctcgcgccccgaggagatggtgctcggctga
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