Pseudogemmatithrix spongiicola: Strain318_002267
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Entry
Strain318_002267 CDS
T10301
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00920
Sulfur metabolism
pspc01100
Metabolic pathways
pspc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Strain318_002267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspc03400
]
Strain318_002267
Enzymes [BR:
pspc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Strain318_002267
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Strain318_002267
DNA repair and recombination proteins [BR:
pspc03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Strain318_002267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
ETF
Motif
Other DBs
NCBI-ProteinID:
WKW15864
UniProt:
A0AA49Q5I5
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All DBs
Position
complement(2473956..2474963)
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AA seq
335 aa
AA seq
DB search
MPAARREAIARLAAELRPGMQVALCTHINADGDGCGSESALARLLGQMGIRAIIVNPTPW
PELFRWLLGDDVEERSAEGAKALAGVDRVIVLDISDLGRLGALADAVRQMPRDALVIDHH
LPGQEPPGKTMLSDTAACATAELVYDFARERGLTISSAIAKSLYTALVTDTGGFRFGNTS
PRCLAVAADLLTVGVDPEEMYHRIYGSVPLGRLHLLREALESLEVDSAHGIAWVRVAAGA
LERFGVSSEDLDGISEYPRSVRGVRLAMLFRDLGHGKVKVSFRSRAGVDVNALAREFGGG
GHTRASGALVAGTLDAVTARVLEAARRHVELSPTL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgccagccgcgcgtcgcgaagcgatcgcgcggctggctgccgagttgcggccgggcatg
caggtcgccctctgcacccacatcaacgccgacggcgacgggtgcggatcggagtccgcg
ctcgcccgcttgctcgggcagatggggatccgcgccatcatcgtgaacccgacgccgtgg
ccggagctgttccgctggctgctcggtgacgacgtcgaggagcggtcggccgagggtgcc
aaggccctcgccggtgtcgatcgcgtcatcgtgctggacatctccgacctcggccgcctc
ggcgcgctcgccgacgccgtgcggcagatgccccgggacgcgctggtgatcgatcaccac
ctgcccgggcaggagccgccgggcaagacgatgctcagcgacacggcggcctgcgccacc
gccgaactcgtgtatgacttcgcgcgcgagcggggcctgacgatcagctcggcgatcgcc
aagtcgctgtacacggcgctcgtcacggacacgggcggtttccgcttcgggaacacatca
ccgcgctgtctcgcggtggcggcggacctgctcacggtcggggtggatcccgaggagatg
taccatcgcatttacggcagcgtaccgctgggacgactgcacttgctgcgcgaggcgctg
gagagccttgaggtggacagtgcccacggcatcgcctgggtgcgggtggcggccggcgcg
ctcgagcgcttcggtgtgtcgtcagaggatctcgacggcatctctgagtacccgcggagc
gtgcgaggcgtccgcctcgcgatgttgttccgggacctcgggcacggcaaggtcaaggtg
tcgttccgcagccgcgcgggcgtggacgtgaacgcgctggcgcgggagttcggcggtggc
gggcacacgcgcgcctccggcgcgctggtcgcggggaccctcgacgcggtgacggcgcgc
gtcctcgaggccgcgcgccgtcacgtggagctttcgccaaccctctag
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