Pseudogemmatithrix spongiicola: Strain318_002412
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Entry
Strain318_002412 CDS
T10301
Name
(GenBank) hypothetical protein
Organism
pspc Pseudogemmatithrix spongiicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RLD
RCC1_2
RCC1
Glyco_hydro2_C5
Big_1
PAC4
Motif
Other DBs
NCBI-ProteinID:
WKW16004
UniProt:
A0AA49Q8Q5
LinkDB
All DBs
Position
2620223..2625262
Genome browser
AA seq
1679 aa
AA seq
DB search
MIESRPLARWSRAVITSAIALLVVSLACAERVTGPGNVRIMEGVRPVFLLDGAPAPLPVG
SVRVLITTIVGARLADTVLTFPGDGSDITLSVPVQVGEGTSEVRTVAEFRDGAGNTLFRS
EPVAVRILFANQGDGPPPSPVSVPLTYVGPGSGRTLQIEVDQAPAVGFAGDTLGLSATVR
DQTSAVVAGVPLVWASLDTTVAQVSSALDGRFVLGPQRGTARLVGSTYTGARDTVTIAVQ
PLPAQLQVVGSATLTDTVATTGASFRVRVLGGDGLPLRDAEVRFTAVGVTLDSTSARSDA
QGEASVRFRLPNLVGTYGVTAAPARGSGSAALTVIAVPDSAVAARVTGVTPPSVRAGDSL
PQLSVGAVDRFGNAVPTFADTVRATLVDTAGQPLGSAVARVPAGGVASFVGLRPLTAAPR
ALVELRAGALPPVRSDTFAVLAASPVALRAIGATPDSSVAGTLLPTLEVEAVDAFGNRAP
QFADSVRIAPIGAGPLLGRRARVATAGVARFDSLALTKAESGVRLALTAAALAPDTTAAI
RVKPAAPARVVVVSDPLTSVVAGDTTLRVGVGVEDAYNNFVPTATNAVTVSLLGGTAALF
GDTARAASAGIASFTGLSVRVAAAGYRLRVAADGLTPDTSAAFAVTPAAAARLAVTAAPT
DSTAAGATLAPFSLTAYDAYDNVARGFADTVTASLNVSPLVATLGGTTKVKADTGKVTFT
GLSIAAAGTAFRLIGSAPGLVPDTSDAFRVYATAAVATVFVTEPQASIVAGDTIVSVTVE
TRDALGNRASTGAPIALTLIGGDAGATLLGTTSLSGDSARATFSGLRLTRAGSAYRLVAS
SGVTTADTSQVFAVTAAAATTLAWVTQPASGAVAGDTLGSFSVAVHDAYGNVVPISTDVI
VLSLSSNPSGASLHGFIGNVASAGIATFGGGTIVGRPGTGFVLQASLAGLTSAQSLPFDV
VPPTPTPRRTILSVGNAVCGIAASDAPYCWGRGYLSAGTASTLGNGTTPEFQGLPLPVSG
GLSLKEISTSTATSCGLTTGGAAYCWGATTNGQLGDGGVSDGSVPAPVQGGLVFRTISVG
TGTGFTQRGFACGVTLQDDGYCWGSNENGQLGNGTTTIATVPTLVSGGLKFATIRADRGF
ACGLTLQGAAYCWGTGAEGQLGNGSVNPSLTPTAVVGGLSFIDLDLGDGTACGLSARGDV
WCWGQYPRGIASGLPASSSTPVSAAFGYRFVEISANINASCGRKADATVWCWGNGALSGG
GSNVAATTPQLVAGGHSFAALARVANATRCAVDVSGAVHCWGFSVDGRLADGVNGLTPSL
VSGAINFASISGGRNHHCGLTGGGTAYCWGLNGSGQVGNGTVSPGQGSFNAPTTVVGGVT
FARLERSTGQVTCGITADSTGYCWGLTHWGDTTGTPTIIPGGHKWIAIAASLSHACGIVA
DSTAYCWGQNTTGVLGDSSTVARATPGPVYGGHRFTRISTNQSQSCGVVANGDIYCWGAG
AGGQLGYGGTTSQTIPTRVASTGITFVDVSTVIGASCGLASTGQAYCWGNGTLVGYGSTT
NALTPTPVAGGLSFSKLRSGANQTCGLATSGAAYCWGENYYAELGNGNTTRQLTPAPVAG
GQVFVDITTGFGIGCGLTAGGQTYCWGRDVFGQRGRAQPAVVYSPTAAQGGITFRTTAP
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatctcgcccgttggcgcgctggtcgcgcgctgtcatcacgagtgccatcgcg
ctactcgtcgtctcgcttgcctgcgccgagcgcgtcactggaccgggcaacgtacgcatc
atggaaggggtgcgaccggtcttcctgctcgatggtgcgcctgccccactgccggtcggc
tcggtgcgcgtgctcatcacgacgatcgtcggcgcacgactcgcggacacggtgctcacg
ttcccgggggacggcagcgacatcacgctgtcggtgccggtgcaggtcggcgagggcacc
agcgaggtacggacggtcgccgagttccgggacggggcgggcaacacgctgttccgctcg
gagcccgtggccgtgcgcatcctgttcgcgaaccagggcgatggaccacctccgtcgccg
gtgagcgtcccgctcacgtacgtgggccccggctccgggcgcacgttgcagatcgaggtg
gaccaagcgccagcggtcggcttcgcgggcgatacgcttggattgagcgcgacggtgcgc
gaccagacgtcggcggtggtggcgggcgtaccgttggtctgggcgtcattggatacgacc
gtcgcgcaggtgtcgtcggccctcgacggacgattcgtcctcggcccgcagcgtggaacg
gcgcggctcgtgggttcgacgtataccggcgcgcgcgacacggtgacgatcgccgtgcag
ccgttgcccgcgcagctgcaggtggtcggcagcgccacgctcactgacacggtggcgacg
acgggcgcctcgttccgcgtgcgcgtgctcggcggcgatggcctgccgctgcgcgatgca
gaggtccgcttcacggcggtaggggtgaccctcgacagcacctcggcgcgctcggatgcg
cagggcgaggcgagtgtccggttccggctaccgaacctggtggggacctacggcgtgacg
gccgcgcccgcgcgcgggagcggcagcgcggcgctgacggtcattgcggtgccggacagc
gccgtcgcggcgcgtgtgacgggcgtgacgcctccgtcggtgcgggccggcgactccctg
ccccaactctcggtcggcgcggtcgatcgcttcggcaacgcggtgccgacgttcgcggat
acagtgcgcgcgacgctggtcgacaccgcgggccagccgctgggcagcgccgtcgcgcgc
gtgcccgcgggcggcgtcgcgagcttcgtgggcttgcgtccgctgacggccgcgccacgc
gcgctcgtcgagctacgggcgggcgcactgccaccggtgcggagcgacactttcgccgtg
cttgcggcgagcccggtggcgctgcgtgcgatcggcgccacgccggacagcagcgtggcc
ggcacgctgctgccgacgctcgaggtcgaggcggtggacgccttcggcaaccgcgcaccg
cagttcgcggactcggtgcgcatcgcaccgatcggtgccggcccgctgctgggccggcgc
gcgcgggtggcgacggccggcgtcgcgcgcttcgacagtctcgcgctgacgaaagctgag
tcgggcgtgcggctggcgctcaccgccgcggcgttggcgccggatacgacggcggcgatt
cgcgtgaagccggcggcgccggcacgcgtagtggtcgtcagcgacccgctcacgagcgtc
gtcgcaggcgacacgacgctgcgtgtgggggtcggcgtcgaggacgcctacaacaacttc
gtgccgacggcgacgaacgcggtcacggtctcgctgctgggcggtaccgccgcgttgttc
ggcgacacggcacgggccgcgagtgcgggcatcgcgtcgttcacggggctgagcgtgcgc
gtggcggcggccgggtatcgcctgcgcgttgcagcggacggcctcacgccggatacctcg
gcggcgttcgcggtgacgccggccgcggcggcgcgccttgcggtgacggccgcgccgacc
gattcgacggccgccggtgcgaccctcgcaccgttctcgctgacggcgtacgacgcgtac
gacaacgttgcgcgcggcttcgccgataccgtgacggcgtcgttgaacgtgagcccgctg
gtggcgacgctgggcgggaccacgaaggtgaaggcggatacgggcaaggtgacgttcacg
gggctatcgatcgcggcggcgggcacggccttccggctcatcgggtcggcaccggggctg
gtgccggacacgtcggatgcgttccgtgtgtacgcgacggcagcggtggcgacggtgttc
gtgacggagccgcaggcgtccatcgtggcgggggacacgatagtctccgtgacggtggag
acgcgtgatgcgctgggaaatcgagcgtctacgggcgcaccgattgcgctcacgttgatt
ggcggtgacgcgggcgcgacgctactcggtacaacatcgttgagcggagactcggcgcgg
gcgaccttcagtgggttgcggctgacgcgggccgggagtgcgtatcggctggtcgcgtcg
agtggcgtgacgactgcggatacgtcgcaagtgtttgcggtgacggcagcggcggcgacc
actctggcttgggtgacgcagccagcgagcggagccgtggcgggggacacgctcggcagc
ttctcggttgcggtacacgatgcgtatgggaacgtcgttccgatcagtacagatgtgatc
gtcctctcactgtcctcgaatccatcgggggcaagcctccacggcttcatcggtaacgtt
gcttccgcgggaattgcgacgttcggcggaggcacgatcgtgggacggccgggtaccggg
tttgtgctccaggcctccctcgctggattgacgtctgcccagagcctgccattcgatgtc
gtcccgccgacaccaacaccgcgccggacgatcctgagcgtaggaaatgccgtctgcggc
atcgcggcgtccgatgcgccgtactgttggggtcggggttacctgagtgctggaaccgcg
tccaccctcgggaacggcactacacccgagttccaaggcctaccattgccggtctcggga
ggcctctcgttgaaggagatttccacttcgactgctacatcgtgtggcctgaccaccggt
ggtgccgcgtactgctggggcgccacgaccaacggtcaactgggcgacggcggcgtgagc
gacggcagcgttcctgccccggtgcagggcggactcgtgtttcggacaatctctgtgggg
accggcactggcttcacgcagcgcgggttcgcctgcggtgtgacattacaggacgacggc
tactgctggggttcgaacgagaacggccagcttggcaacggcacgacaacgatcgcgacg
gtgccgactcttgtatctggaggcctcaagttcgcgaccattcgcgcagaccgaggcttc
gcgtgcggtctcacgctccagggcgcagcatattgttggggtaccggagccgaaggccaa
ctgggcaacggcagcgtcaatccgtccttgaccccgacagcggtggttggcgggctgagc
ttcatcgatctcgacctcggcgacggcaccgcgtgcggtctgagtgcgcgcggagatgtg
tggtgttgggggcagtacccgcgcggtatcgcctcgggactacccgcgagctccagcacg
ccggtgtcggcggcattcggatatcgtttcgtcgagatctcggcgaacatcaacgcaagc
tgcggccgaaaggccgacgccaccgtgtggtgctgggggaacggtgcgttgtccggcggt
ggctctaacgtcgcagcgaccacaccgcagttggtggcaggcgggcactcattcgccgcg
ctcgcgcgcgtggcaaacgcgacgcgttgcgcggtcgacgtgagtggtgcggtgcactgc
tggggattctccgtcgatggtcgactggccgacggtgtgaacgggctgacgccgtcgctc
gtgtcgggggcaatcaactttgcgagcatcagcggtggccggaaccaccactgcggtctg
acgggcggcgggacggcgtactgctgggggctcaatggcagcggccaggttggcaacgga
accgtgtctccaggccaagggtcttttaatgctccaaccactgtcgtcgggggcgtcacc
ttcgcgcgcctcgagcgcagcacgggacaagtcacctgcggcatcaccgcggacagtacc
ggttactgctggggcctgacccactggggagacaccaccggaacgcccaccatcataccg
ggcgggcataagtggatcgccattgcggcgagtctctcccacgcctgcggcattgtcgcg
gacagcacggcgtactgctgggggcagaacacgactggcgtcctcggtgacagcagcacg
gtcgcccgtgcgacccccggaccagtttacggcggccatcggttcacccgcatctctacg
aaccagtcgcagagttgcggcgtcgtcgcgaatggtgacatctactgctggggcgccggc
gcaggtggccaacttggatacgggggaacgacctcgcagacgataccaacacgcgtggcg
agcacggggattaccttcgttgacgtctcaaccgtgattggagcaagctgcgggcttgca
tcgaccggccaggcctactgctggggcaatggcacgctcgtcggatatggttcaacgacc
aatgccctgaccccgacgcccgttgcgggcggactttcgtttagcaagctgcggagcggt
gcaaaccaaacctgtgggctagcaacatcgggcgctgcctactgctggggcgagaactac
tacgccgagctaggtaacggcaacacgacgcgccagctcacgcccgccccggtcgccgga
ggccaggtcttcgtggacatcacgacgggcttcgggataggctgcggactcacggccggc
ggacagacgtattgctggggtcgtgacgtctttggacagcgcgggcgggcacaacccgcg
gtggtgtatagccccaccgccgctcaaggcggcatcaccttccggacaacggcgccgtag
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