Pseudogemmatithrix spongiicola: Strain318_002418
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Entry
Strain318_002418 CDS
T10301
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc00240
Pyrimidine metabolism
pspc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Strain318_002418
Enzymes [BR:
pspc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
Strain318_002418
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
WKW16010
UniProt:
A0AA49JW40
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All DBs
Position
complement(2631273..2632184)
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AA seq
303 aa
AA seq
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MSASRAVRVSEEVAASRTARRGIVALESSVLAQGLPIPQNAEAARRMDAAVRAAGATPAV
TAVVRGELTLGLADNDLARFLAREGIEKVSARDLGVACALGADGATTVAASLAICRLTGV
QVFATGGIGGVHREPAFDESADLLELSRTPAIVVCAGAKSILDLPATLERLESYGVPVIG
YRGHEFPGFFTAETGLRVPAAAHTPEAIAKMAQAHWHTAGQSSALLVVQPPPAEFALASA
EVDALVLAAVEEARQRGIRGAALTPHLLAAIATATGGRSMTANLALLEANAALAGAIAQA
LAA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcatcacgcgcggtccgggtcagtgaggaggtcgctgcgtcgcgaacggcgcgg
cgaggcatcgtggccctggagagctccgtgctcgcccagggccttcccattccccagaac
gccgaagcggcgcgtcgcatggacgccgccgtgcgcgcggccggcgcgacgccggcggtc
acggccgtcgtgcgcggcgaactgacgctcgggctcgccgacaacgatctcgcgcggttc
ttggcgcgcgagggcatcgagaaggtctcggcccgcgacctcggcgtcgcctgcgccttg
ggggccgatggcgcgacgaccgtggcggcatcgctggccatctgtcgcctgacgggcgtg
caggtgttcgcgaccggcggcatcggcggcgtccaccgtgaacctgccttcgacgaatcg
gccgatctgctcgagctctcgcgcacgccggcgatcgtggtctgcgccggtgcgaagtcc
atcctcgacctgcccgcgacgttggagcggctcgagtcctacggcgtgccggtgattggg
tatcgcggccatgagtttccaggcttcttcacggcggagacgggcctgcgcgtgccggcg
gcggcgcacacgccggaagccatcgcgaagatggcacaggcccattggcacacggccggt
cagtcctcggcgctcctcgtggtgcagccgccgccagccgagttcgcgctcgccagcgcg
gaggtggacgcgctcgtcctcgccgcggtggaggaggcgcgccaacgtggcatccgcggc
gcggcactgaccccgcacctgctcgccgccatcgccaccgcaaccggaggtcgctcgatg
acggcaaacctcgcactgctggaagccaacgccgcgctcgccggtgcgatcgcgcaggcg
ctcgccgcatga
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